ID A0DGT8_PARTE Unreviewed; 373 AA.
AC A0DGT8;
DT 28-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 28-NOV-2006, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=Chromosome undetermined scaffold_5, whole genome shotgun sequence {ECO:0000313|EMBL:CAK82255.1};
GN ORFNames=GSPATT00002384001 {ECO:0000313|EMBL:CAK82255.1};
OS Paramecium tetraurelia.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata;
OC Oligohymenophorea; Peniculida; Parameciidae; Paramecium.
OX NCBI_TaxID=5888 {ECO:0000313|EMBL:CAK82255.1, ECO:0000313|Proteomes:UP000000600};
RN [1] {ECO:0000313|EMBL:CAK82255.1, ECO:0000313|Proteomes:UP000000600}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Stock d4-2 {ECO:0000313|EMBL:CAK82255.1,
RC ECO:0000313|Proteomes:UP000000600};
RX PubMed=17086204; DOI=10.1038/nature05230;
RG Genoscope;
RA Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M.,
RA Segurens B., Daubin V., Anthouard V., Aiach N., Arnaiz O., Billaut A.,
RA Beisson J., Blanc I., Bouhouche K., Camara F., Duharcourt S., Guigo R.,
RA Gogendeau D., Katinka M., Keller A.-M., Kissmehl R., Klotz C., Koll F.,
RA Le Moue A., Lepere C., Malinsky S., Nowacki M., Nowak J.K., Plattner H.,
RA Poulain J., Ruiz F., Serrano V., Zagulski M., Dessen P., Betermier M.,
RA Weissenbach J., Scarpelli C., Schachter V., Sperling L., Meyer E.,
RA Cohen J., Wincker P.;
RT "Global trends of whole-genome duplications revealed by the ciliate
RT Paramecium tetraurelia.";
RL Nature 444:171-178(2006).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the ANKZF1/VMS1 family.
CC {ECO:0000256|ARBA:ARBA00009262}.
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DR EMBL; CT868429; CAK82255.1; -; Genomic_DNA.
DR RefSeq; XP_001449652.1; XM_001449615.1.
DR AlphaFoldDB; A0DGT8; -.
DR STRING; 5888.A0DGT8; -.
DR EnsemblProtists; CAK82255; CAK82255; GSPATT00002384001.
DR GeneID; 5035437; -.
DR KEGG; ptm:GSPATT00002384001; -.
DR eggNOG; KOG2505; Eukaryota.
DR HOGENOM; CLU_742845_0_0_1; -.
DR InParanoid; A0DGT8; -.
DR Proteomes; UP000000600; Partially assembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; IBA:GO_Central.
DR InterPro; IPR047139; ANKZ1/VMS1.
DR InterPro; IPR041175; VLRF1/Vms1.
DR PANTHER; PTHR16036; ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR16036:SF2; ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF18826; bVLRF1; 1.
PE 3: Inferred from homology;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000000600};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 226..366
FT /note="VLRF1"
FT /evidence="ECO:0000259|Pfam:PF18826"
FT COILED 181..212
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 373 AA; 43673 MW; 52ED7970C112FDC6 CRC64;
MITNLFNQPE ISKTIISCLN SKDLANFSRC NKYFKNQLNF ILKKYLEQRL MHFLNSLREI
YNFRKKTIPM LPKVLYKVPK NMEIKIKDLG AQVIKIQLKD LPKQFLNLNW QPVNINAILP
EDSKLSTQEN KAFKYNENYI IINRSLIDQG LNYEFLEVNE DCSKEILEKI AQSNEFANYQ
LNDMQSILRR QKEILERVNQ NKQKVIKQKQ QQEPNLQQLD DVQKFAIILC HGGYFCLGVF
DNTGCIYHKS DHRYVVRGKA GGRQLNKDSH SGSNIKSIGS QIRRAQEKKH QEKVNSILKE
AVPILQTCQI LFLQAPGINQ QLLIQNEEPL FLLKDKIRSI CLTAKKANYT EVERVYKSIT
SVYLIQKEES FFF
//
