ID A0L7M6_MAGMM Unreviewed; 773 AA.
AC A0L7M6;
DT 12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT 12-DEC-2006, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE SubName: Full=RNA binding S1 domain protein {ECO:0000313|EMBL:ABK43969.1};
GN OrderedLocusNames=Mmc1_1460 {ECO:0000313|EMBL:ABK43969.1};
OS Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Magnetococcales;
OC Magnetococcaceae; Magnetococcus.
OX NCBI_TaxID=156889 {ECO:0000313|EMBL:ABK43969.1, ECO:0000313|Proteomes:UP000002586};
RN [1] {ECO:0000313|Proteomes:UP000002586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1437 / JCM 17883 / MC-1
RC {ECO:0000313|Proteomes:UP000002586};
RX PubMed=19465526; DOI=10.1128/AEM.02874-08;
RA Schubbe S., Williams T.J., Xie G., Kiss H.E., Brettin T.S., Martinez D.,
RA Ross C.A., Schuler D., Cox B.L., Nealson K.H., Bazylinski D.A.;
RT "Complete genome sequence of the chemolithoautotrophic marine magnetotactic
RT coccus strain MC-1.";
RL Appl. Environ. Microbiol. 75:4835-4852(2009).
RN [2] {ECO:0000313|EMBL:ABK43969.1, ECO:0000313|Proteomes:UP000002586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1437 / JCM 17883 / MC-1
RC {ECO:0000313|Proteomes:UP000002586};
RX PubMed=22581902;
RA Bazylinski D.A., Williams T.J., Lefevre C.T., Berg R.J., Zhang C.L.,
RA Bowser S.S., Dean A.J., Beveridge T.J.;
RT "Magnetococcus marinus gen. nov., sp. nov., a marine, magnetotactic
RT bacterium that represents a novel lineage (Magnetococcaceae fam. nov.;
RT Magnetococcales ord. nov.) at the base of the Alphaproteobacteria.";
RL Int. J. Syst. Evol. Microbiol. 0:0-0(2012).
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DR EMBL; CP000471; ABK43969.1; -; Genomic_DNA.
DR AlphaFoldDB; A0L7M6; -.
DR STRING; 156889.Mmc1_1460; -.
DR KEGG; mgm:Mmc1_1460; -.
DR eggNOG; COG2183; Bacteria.
DR HOGENOM; CLU_009833_0_2_5; -.
DR Proteomes; UP000002586; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000002586}.
FT DOMAIN 652..721
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 723..760
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 61..95
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 773 AA; 84690 MW; 339E5AC9F10D6098 CRC64;
MKSIAQRIAL SLDVRENQVV AAINLLDEGA TVPFIARYRK EVTGGLSDIH LRDLLGLLTQ
LRELEARREV VLKSIQEQEK LTPQLERAIQ EAESKTVLED LYLPYRPKRR TKAQIAREAG
LAPLAETLFK QPEHHPARLA ANYLNPEQGI TDVEAALEGA QQILIEQFTE EASLVGQARE
SLWESGLLHA KVVKGKELEG EKFADYFEFE QPVNRLPSHR ILALLRGKEA GILRLSLSHR
QDAQAQKGAM PFGALLICRH FKLENHNRPA DLWRQSCGVE AWKKRLKPSL DSDLLKRLTE
LAQAEAVRVF AANLKDLLLS APAGMVPVMG LDPGLRTGVK VAVVDATGQV QTTATIYPHQ
PRNDWEGSIK ALSLLIKKYK VPLIAIGNGT ASRETDRLVA ELNRRHPDLK VTAVVVSEAG
ASVYSASAYA SQELPEMDVS LRGAVSIARR LQDPLAELVK IDPKSIGVGQ YQHDVDPKQL
DQALDGVVED AVNSVGVDVN TASIPLLQRV SGLNSTLAQN IVAFRDKNGP FANRKGLNKV
PRFGAKTFEL AAGFLRIQNG DTPLDGSAVH PEAYPLVERI VRQTRTTLPQ LMGHPEVLKQ
LTPKDFVDTQ FGEPTIRDIL KELEKPGRDP RPSFKTATFQ EGVEDIKDLQ PGMVLEGVVS
NVTNFGAFVD IGVHQDGLVH ISAMSNQFVK DPHQVTRAGA VVQVKVMEID LNRRRIALSM
RLEDQPGAEA SQATAQSATP HKGGAPTKRP TAPPQAPPDN AMAAAFAKLK QGG
//
