ID A1B3K3_PARDP Unreviewed; 629 AA.
AC A1B3K3;
DT 23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 23-JAN-2007, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE SubName: Full=AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABL70097.1};
GN OrderedLocusNames=Pden_2005 {ECO:0000313|EMBL:ABL70097.1};
OS Paracoccus denitrificans (strain Pd 1222).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Paracoccus.
OX NCBI_TaxID=318586 {ECO:0000313|EMBL:ABL70097.1, ECO:0000313|Proteomes:UP000000361};
RN [1] {ECO:0000313|Proteomes:UP000000361}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Pd 1222 {ECO:0000313|Proteomes:UP000000361};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Spiro S.,
RA Richardson D.J., Moir J.W.B., Ferguson S.J., van Spanning R.J.M.,
RA Richardson P.;
RT "Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000489; ABL70097.1; -; Genomic_DNA.
DR RefSeq; WP_011748294.1; NC_008686.1.
DR AlphaFoldDB; A1B3K3; -.
DR STRING; 318586.Pden_2005; -.
DR EnsemblBacteria; ABL70097; ABL70097; Pden_2005.
DR GeneID; 75501497; -.
DR KEGG; pde:Pden_2005; -.
DR eggNOG; COG0318; Bacteria.
DR HOGENOM; CLU_000022_59_0_5; -.
DR OrthoDB; 9803968at2; -.
DR Proteomes; UP000000361; Chromosome 1.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR CDD; cd05944; FACL_like_4; 1.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; N-terminal domain of ligase-like; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig_com.
DR InterPro; IPR042099; ANL_N_sf.
DR PANTHER; PTHR43201; ACYL-COA SYNTHETASE; 1.
DR PANTHER; PTHR43201:SF5; MEDIUM-CHAIN ACYL-COA LIGASE ACSF2, MITOCHONDRIAL; 1.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR SUPFAM; SSF56801; Acetyl-CoA synthetase-like; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
PE 4: Predicted;
KW Ligase {ECO:0000313|EMBL:ABL70097.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000361}.
FT DOMAIN 34..430
FT /note="AMP-dependent synthetase/ligase"
FT /evidence="ECO:0000259|Pfam:PF00501"
FT DOMAIN 484..560
FT /note="AMP-binding enzyme C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13193"
SQ SEQUENCE 629 AA; 68464 MW; 8AA510A8FCA36F5A CRC64;
MARFASVADR DAVEAEMPYA ERQVPHTVYQ ALTETRDRHP QRPAISFQLF SDPKAPARTL
TWTELHERVT ETANLFRSLG VGPDDVVAYL LPNCIEAPVV LLAGATAGIV NPINPLLEPD
HIAAILRETG AKVLVTLKSF PKSEVAQKAA DAVAQAPNVQ TVLEVDLRGY LTGVKRLLVP
LMRPKVTARH HAKVMDFDAA ASAQKHNRLT FDEPAEDRVA AFFHTGGTTG MPKVAQHKQS
GMIYNGWLGG TLLFTETDVL MCPLPMFHVF AAYPVLMSCL MSGAQLVMPT PAGYRGEGVF
DNFWKLIERW QATFLITVPT AIAALMQRPV NADVSSLKTA ISGSAPLPIE LYNRFKAATG
VEIAEGYGLT EATCLVSCNP INGLKKVGSV GIPLPHTHVR ILQRRNGGFH ECATDEIGEI
CVANPGVFEG STYTEADKNH DLFAESRFLR TGDLGRMDAD GYLWITGRAK DLIIRGGHNI
DPAEIEDALL SHPKVAAVAA IGQPDSFAGE LPCAYVELIA GAEVGLDELM EHARTHIHER
AAVPKHVEIL PELPKTTVGK IFKPDLRKLA IRRVYDSALA EAGLAAEVGE VVDDRKRGLV
AHIRPKGQVD RSAVEQLLGQ YALPWEWVG
//
