GenomeNet

Database: UniProt
Entry: A1C5V3
LinkDB: A1C5V3
Original site: A1C5V3 
ID   DBP3_ASPCL              Reviewed;         503 AA.
AC   A1C5V3;
DT   20-MAR-2007, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 1.
DT   11-DEC-2019, entry version 70.
DE   RecName: Full=ATP-dependent RNA helicase dbp3;
DE            EC=3.6.4.13;
GN   Name=dbp3; ORFNames=ACLA_068010;
OS   Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
OS   NRRL 1).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus.
OX   NCBI_TaxID=344612;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1;
RX   PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA   Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA   Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA   Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA   Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA   Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA   White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA   Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT   "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT   fumigatus.";
RL   PLoS Genet. 4:E1000046-E1000046(2008).
CC   -!- FUNCTION: ATP-dependent RNA helicase required for 60S ribosomal subunit
CC       synthesis. Involved in efficient pre-rRNA processing, predominantly at
CC       site A3, which is necessary for the normal formation of 25S and 5.8S
CC       rRNAs (By similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC   -!- DOMAIN: The Q motif is unique to and characteristic of the DEAD box
CC       family of RNA helicases and controls ATP binding and hydrolysis.
CC   -!- SIMILARITY: Belongs to the DEAD box helicase family. DDX5/DBP2
CC       subfamily. {ECO:0000305}.
DR   EMBL; DS027045; EAW13774.1; -; Genomic_DNA.
DR   RefSeq; XP_001275200.1; XM_001275199.1.
DR   SMR; A1C5V3; -.
DR   STRING; 5057.CADACLAP00006888; -.
DR   PRIDE; A1C5V3; -.
DR   EnsemblFungi; EAW13774; EAW13774; ACLA_068010.
DR   GeneID; 4708133; -.
DR   KEGG; act:ACLA_068010; -.
DR   EuPathDB; FungiDB:ACLA_068010; -.
DR   HOGENOM; HOG000268804; -.
DR   KO; K14811; -.
DR   OMA; AYGAFFK; -.
DR   OrthoDB; 471730at2759; -.
DR   Proteomes; UP000006701; Unassembled WGS sequence.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   3: Inferred from homology;
KW   ATP-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus;
KW   Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing.
FT   CHAIN           1..503
FT                   /note="ATP-dependent RNA helicase dbp3"
FT                   /id="PRO_0000281695"
FT   DOMAIN          116..292
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   DOMAIN          323..472
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT   NP_BIND         129..136
FT                   /note="ATP"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   MOTIF           104..112
FT                   /note="Q motif"
FT   MOTIF           239..242
FT                   /note="DEAD box"
SQ   SEQUENCE   503 AA;  54695 MW;  486F0EF1718B8C5F CRC64;
     MGKRVSHNEG ADRRPKKKAK NEKPEKETME SPAADVTVDF GSKSDATYVQ SQVLSDMPQS
     EIDQFLATHS IKVTDTSDAP AVRPIISFSH LPSCDSKLYS SLSSFASPTP IQSATWPLLF
     AGRDVIGIAE TGSGKTLAFG LPCLKKILDS GKIKFKNARP AAVIISPTRE LAMQIYDQIS
     KYAGSIGIKA TCIFGGVKKD EQREALKSAA IVVATPGRLK DLQNDGSVDL GKVKYLVLDE
     ADRMLDKGFE QDIKDIISST PDSKRQTVMF TATWPPSVRD LAATFMTSAV TVTIGGDPSA
     DPRANTRIKQ TVEVVQSHDK EYRLVQLLSE NQRGAAALDK VLVFCLYKKE AMRVERLLRN
     KNFKVAGIHG DLNQHERFKS LDAFKSGAAT VLVATDVAAR GLDIPSVKLV INVTFPLTVE
     DYVHRIGRTG RAGAEGRAIT LFTETDKAQS GALINVLKAA KQEVPQELLK FGTTVKKKQH
     GAYGAFFKEA DSGKSATKIV FDD
//
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