ID A1C6Z1_ASPCL Unreviewed; 391 AA.
AC A1C6Z1;
DT 23-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 23-JAN-2007, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Ribosomal RNA-processing protein 42 {ECO:0000256|ARBA:ARBA00042523};
GN ORFNames=ACLA_071950 {ECO:0000313|EMBL:EAW14162.1};
OS Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
OS NRRL 1 / QM 1276 / 107).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus;
OC Aspergillus subgen. Fumigati.
OX NCBI_TaxID=344612 {ECO:0000313|EMBL:EAW14162.1, ECO:0000313|Proteomes:UP000006701};
RN [1] {ECO:0000313|EMBL:EAW14162.1, ECO:0000313|Proteomes:UP000006701}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1
RC {ECO:0000313|Proteomes:UP000006701};
RX PubMed=18404212; DOI=10.1371/journal.pgen.1000046;
RA Fedorova N.D., Khaldi N., Joardar V.S., Maiti R., Amedeo P., Anderson M.J.,
RA Crabtree J., Silva J.C., Badger J.H., Albarraq A., Angiuoli S., Bussey H.,
RA Bowyer P., Cotty P.J., Dyer P.S., Egan A., Galens K., Fraser-Liggett C.M.,
RA Haas B.J., Inman J.M., Kent R., Lemieux S., Malavazi I., Orvis J.,
RA Roemer T., Ronning C.M., Sundaram J.P., Sutton G., Turner G., Venter J.C.,
RA White O.R., Whitty B.R., Youngman P., Wolfe K.H., Goldman G.H.,
RA Wortman J.R., Jiang B., Denning D.W., Nierman W.C.;
RT "Genomic islands in the pathogenic filamentous fungus Aspergillus
RT fumigatus.";
RL PLoS Genet. 4:E1000046-E1000046(2008).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RNase PH family.
CC {ECO:0000256|ARBA:ARBA00006678}.
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DR EMBL; DS027045; EAW14162.1; -; Genomic_DNA.
DR RefSeq; XP_001275588.1; XM_001275587.1.
DR AlphaFoldDB; A1C6Z1; -.
DR STRING; 344612.A1C6Z1; -.
DR EnsemblFungi; EAW14162; EAW14162; ACLA_071950.
DR GeneID; 4708263; -.
DR KEGG; act:ACLA_071950; -.
DR VEuPathDB; FungiDB:ACLA_071950; -.
DR eggNOG; KOG1612; Eukaryota.
DR HOGENOM; CLU_046570_0_0_1; -.
DR OMA; INKRWHW; -.
DR OrthoDB; 2070785at2759; -.
DR Proteomes; UP000006701; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:UniProt.
DR Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR PANTHER; PTHR11097:SF8; EXOSOME COMPLEX COMPONENT RRP42; 1.
DR PANTHER; PTHR11097; EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW Reference proteome {ECO:0000313|Proteomes:UP000006701}.
SQ SEQUENCE 391 AA; 41573 MW; 25AA07A6E0236EEA CRC64;
MSAQRQASSA SQTPHLSPAE LSYLYTSLAL PDSPIRPDGR SSTQFRPLSA ETDILPGTNG
SARVGFADGT QAIVGVKAEV EKTVIPTEAL RVSVSQLSRG DDGAEDKDGA GAAGGHESWV
QMSIEIPGFR DDDALPVFLS EMMREPLIES VSSGQGGDAE MAGGLKGRLV INRRWHWRLY
IDVLLLSQPL SYPLPLLSLT THLALLSTRL PKLKSQGEED PFFDDDWNAA EYLYPRSGTG
SGVKDASVPS PLQYVRPPVT LLVISVGDNI IFDPNREEIA VADAVMALSV TRDGETGGLK
LLSIRTVDPP SRLTQPGVPN SENVATLGST VAAEEAAIVN PSTGEEEVPG VWRPRRGGVK
RGTVARMVKM VLEKGGVGED VLEGLEGVSV G
//
