ID A1L4W6_ARATH Unreviewed; 419 AA.
AC A1L4W6;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 24-JAN-2024, entry version 116.
DE SubName: Full=At1g16290 {ECO:0000313|EMBL:ABM06023.1};
DE SubName: Full=Transglycosylase {ECO:0000313|EMBL:AEE29432.1};
GN OrderedLocusNames=At1g16290 {ECO:0000313|Araport:AT1G16290,
GN ECO:0000313|EMBL:AEE29432.1};
GN ORFNames=F3O9.9 {ECO:0000313|EMBL:AEE29432.1}, F3O9_9
GN {ECO:0000313|EMBL:AEE29432.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ABM06023.1};
RN [1] {ECO:0000313|EMBL:AEE29432.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|EMBL:ABM06023.1}
RP NUCLEOTIDE SEQUENCE.
RA Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AEE29432.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AEE29432.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; BT029753; ABM06023.1; -; mRNA.
DR EMBL; CP002684; AEE29432.1; -; Genomic_DNA.
DR RefSeq; NP_173079.2; NM_101495.3.
DR AlphaFoldDB; A1L4W6; -.
DR SMR; A1L4W6; -.
DR PaxDb; 3702-AT1G16290-1; -.
DR ProteomicsDB; 178857; -.
DR DNASU; 838198; -.
DR EnsemblPlants; AT1G16290.1; AT1G16290.1; AT1G16290.
DR GeneID; 838198; -.
DR Gramene; AT1G16290.1; AT1G16290.1; AT1G16290.
DR Araport; AT1G16290; -.
DR TAIR; AT1G16290; -.
DR HOGENOM; CLU_034798_1_0_1; -.
DR OMA; DCGHRAY; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; A1L4W6; baseline and differential.
DR GO; GO:0005773; C:vacuole; HDA:TAIR.
DR CDD; cd00254; LT-like; 1.
DR Gene3D; 1.10.530.10; -; 2.
DR InterPro; IPR023346; Lysozyme-like_dom_sf.
DR InterPro; IPR008258; Transglycosylase_SLT_dom_1.
DR PANTHER; PTHR37179; TRANSGLYCOSYLASE; 1.
DR PANTHER; PTHR37179:SF1; TRANSGLYCOSYLASE; 1.
DR Pfam; PF01464; SLT; 1.
DR SUPFAM; SSF53955; Lysozyme-like; 2.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:A1L4W6,
KW ECO:0007829|ProteomicsDB:A1L4W6};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 75..182
FT /note="Transglycosylase SLT"
FT /evidence="ECO:0000259|Pfam:PF01464"
FT REGION 197..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 209..226
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 419 AA; 47941 MW; EF6093CAECFF6572 CRC64;
MANSFTFWND CVEPEDLEEM WMDPAVSAEW IDVGETKGQK VHLSRDPDGQ PYLTQTEMRA
VSDITVRRHF DSILDSEMIC AIAELESDRK PLIMRYSKKT KETGLGILQV FEKTAAWLAG
GQGYQAYNVD DNPDLLHKPF INVYFGAAYL KWLTDYQNNQ RSEEFVVRAY NGGTKKATHK
STLPYWKRYL AVKESLPSRK HGDAGPSSFR PTNPASPGSN TDFTYWDSRA SPEDMEDMWN
QSEICKEWTK SKEERGKVRF SQDGEKRPYL SRGELKAVAE IIVSKYFSTK GIRVPLVCAI
ADTVCMRFVN GIKKHVGILG VDYSTASWLY SELGYRAYRV DSADDLTKPF ISMYFGVAYL
VWLSEYEGSQ RSNQFIVQAY MKGPDHVDLE ESCPLWLKFE QALSYYEESK RDSGSCVIL
//
