ID A1SCI1_NOCSJ Unreviewed; 1980 AA.
AC A1SCI1;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 98.
DE SubName: Full=DNA primase catalytic core, N-terminal domain {ECO:0000313|EMBL:ABL79516.1};
GN OrderedLocusNames=Noca_4936 {ECO:0000313|EMBL:ABL79516.1};
OS Nocardioides sp. (strain ATCC BAA-499 / JS614).
OG Plasmid pNOCA01 {ECO:0000313|EMBL:ABL79516.1,
OG ECO:0000313|Proteomes:UP000000640}.
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL79516.1, ECO:0000313|Proteomes:UP000000640};
RN [1] {ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RC PLASMID=pNOCA01 {ECO:0000313|Proteomes:UP000000640};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J.,
RA Richardson P.;
RT "Complete sequence of plasmid pNOCA01 of Nocardioides sp. JS614.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABL79516.1, ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RC PLASMID=pNOCA01 {ECO:0000313|EMBL:ABL79516.1,
RC ECO:0000313|Proteomes:UP000000640};
RX PubMed=21551312; DOI=10.1128/JB.05109-11;
RA Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C., Copeland A.,
RA Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A., Hammon N.M., Han S.,
RA Hauser L.J., Israni S., Kim E., Kyrpides N., Land M.L., Lapidus A.,
RA Larimer F.W., Lucas S., Pitluck S., Richardson P., Schmutz J., Tapia R.,
RA Thompson S., Tice H.N., Spain J.C., Gossett J.G., Mattes T.E.;
RT "Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete
RT Nocardioides sp. strain JS614.";
RL J. Bacteriol. 193:3399-3400(2011).
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DR EMBL; CP000508; ABL79516.1; -; Genomic_DNA.
DR RefSeq; WP_011751641.1; NC_008697.1.
DR KEGG; nca:Noca_4936; -.
DR eggNOG; COG0358; Bacteria.
DR eggNOG; COG0507; Bacteria.
DR eggNOG; COG3115; Bacteria.
DR HOGENOM; CLU_001748_1_2_11; -.
DR OrthoDB; 4524286at2; -.
DR Proteomes; UP000000640; Plasmid pNOCA01.
DR CDD; cd17933; DEXSc_RecD-like; 1.
DR CDD; cd18809; SF1_C_RecD; 1.
DR CDD; cd03364; TOPRIM_DnaG_primases; 1.
DR Gene3D; 3.40.1360.10; -; 1.
DR Gene3D; 3.90.980.10; DNA primase, catalytic core, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR037068; DNA_primase_core_N_sf.
DR InterPro; IPR013264; DNAG_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR034151; TOPRIM_DnaG_bac.
DR InterPro; IPR006171; TOPRIM_domain.
DR InterPro; IPR014862; TrwC.
DR NCBIfam; NF041492; MobF; 1.
DR PANTHER; PTHR30313; DNA PRIMASE; 1.
DR PANTHER; PTHR30313:SF2; DNA PRIMASE; 1.
DR Pfam; PF13604; AAA_30; 1.
DR Pfam; PF08275; DNAG_N; 1.
DR Pfam; PF13155; Toprim_2; 1.
DR Pfam; PF08751; TrwC; 1.
DR SMART; SM00493; TOPRIM; 1.
DR SUPFAM; SSF56731; DNA primase core; 1.
DR SUPFAM; SSF55464; Origin of replication-binding domain, RBD-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:ABL79516.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000640}.
FT DOMAIN 1732..1811
FT /note="Toprim"
FT /evidence="ECO:0000259|SMART:SM00493"
FT REGION 1316..1340
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1453..1482
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1495..1534
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1926..1980
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1516..1534
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1926..1949
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1980 AA; 215073 MW; AF671C76D1710ACF CRC64;
MGVHKLTAGD GYTYLTRQVA VHDATDRGHA GLADYYAEKG ESPGRWFGAG LGALDLEVGS
QVTETHMRNL FGEGRHPDAE RLENAVLDAG KSVEQAKKAS QLGRVFARYL GNQPEFIQET
AKRYIAYNLA HGEHWKTPVP AEVRAQIRTE LGNEHFLREH GRAPIDDRER GSFMAKATRQ
QTTAVAGYDL TFAPVKSVST LWALADRDVA KEIEAAHHSA VEATLSWLEK EVLFTRRGRG
GLQQVKAKGL IAGMFTHRDA RSSDPHLHTH VAVSNKVQDE TGRWLAVDGR VLFKANVTLA
EMYNTLIESE LIARLGVRFE NRRSGLAKGV DKRPVREIVG VDERLAKTWS KRHSAIEARR
RELAAAFQTE HGRPPTEGEA VTLAEKAWDQ TRQAKHAPRA EADQRAAWLT EAAAIIGSEQ
AVRDMVEGCL GHRPDSQDVT DEWVAETAQD VVERVAEDRA TWQVWHLHAE AQRQARAHRV
RLPDLDAAVD RVVATAIADH SIAFNAPDPL THAATAAEQD VTIPEPLQRT EHGVNGEEIV
SVYSLAGARQ YTSQAVIDAE RRIVESARRT GGRTISEVRV GIAIAEAAAN ELQLNAAQQS
LVREMATSGR AVQLALAPAG TGKTTAMQVL TRAWQDSGGT VIGLAPSAVA AQELGASINP
ETGDAGVGAG GKAMGLFQGP WRPGRKKVRA DTLAKLVWHA EKGGAPSWVE RINPKTLVLI
DEAGMAATTD LAAAIDYITS RGGQVRLVGD DRQLASVAAG GVLRDIAHQI GAVTLSEVHR
FRNRDGSLNH AEAAATLALR EGDPSAIAFY ADRGRIHVGD LGACADQAYA AWAADRAADT
DSVLIAPTRA LVAELNTRAR NDRLAGLDEK EIGRVLTLAD GSRVSEGDRI ITRENDRRLR
ISRTNWVKNG DRWHVKKVNA DGSLRVVHDQ LGKTITLPAD YVSKTVQLGY ATTVHGAQGI
TTGTCHVVLT GDEDRNLLYV ALSRGKFANH LYLNVASDGD PHNLIRPEAL IPPTALDRIA
EMLRRDGSPV SATTTLREQT NPHQLLGDMA SRYHDAVTAG AENLIGTTGM DKIDAHAEAL
LTGLTEAPAW PTLRSHLALV ALDEHSPLKL LTAAVGVGSL ADARDPAAVL DARVDDLVAE
LTAARPHDRD TPPPADGPLP WLPGIPARLG EAHDWGPFAA AYHQLVREQI DAVREQARGW
TGATAPVWAQ PFLEDEDADL RADLAVWRAV AGTDENDLRP TGDRNIGAPG AYQAKLNRAV
RAARPSYPFS QRTWYQVLPE VVRQDPWITP LCQRLARLER AGLPVTDYIK EALATDPSLA
GGQSGTDTDA PQSAEVDPRP LPDEQQAAAL WWRLVPHLGP AALGADEHSA NLLQPAWRTA
LAELVGTTKA DYLQKSPAWP ALVAAVDEAC EHHGWTPAEI LSRALAGVPQ DGSLTGVEVA
DALVLRIAML TDQPSEAPPP SDDEAPYPEA DVPADPDLLP PEDADEFMAA FYRDQPDDNS
APVFHSPAPG EYDALATEPV DREPPPDEHD PTYDDVAIGD YPYVEDPYAT TLPWEQAEEV
TAENAFPDPN QIPAERIHEL NQQALAYFES CYPRSWAPDY LRERMGTDLT DQPNYALGYA
PGGGRSLMRH LTDQGATLDE LTQAGLVSQR ERDDGTTYCR DFFRDRLVLP IRDPHDPTSE
AILGFVGRRN PTKTDDDFAG PKYLNTRNTS IFTKGEALFG YAEARELLAN GALPVIVEGP
MDALAITLGS NGAAVGLAPM GTALTINQIK LLRANIEMVN GRDRIAVATD SDPAGWKSAQ
KAFWHLTAAD LDPTQLELPD GLDPAKLFET EGADAIAAAI ENRSPLGDAM IDHLLRTAGH
WSETDVRQKL IHQAARILGS RGSESWLDGF ERLRHKLHLA PGILEHQTVT ESMERDRNRP
AYAQARIDEI NAEERKRTAK ADPQSRRRAA EQRLAAATTT PRRPGLDVPP TGPDHAGPAR
//
