ID A1SMN5_NOCSJ Unreviewed; 372 AA.
AC A1SMN5;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 24-JAN-2024, entry version 74.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN OrderedLocusNames=Noca_3570 {ECO:0000313|EMBL:ABL83070.1};
OS Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL83070.1, ECO:0000313|Proteomes:UP000000640};
RN [1] {ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J.,
RA Richardson P.;
RT "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABL83070.1, ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX PubMed=21551312; DOI=10.1128/JB.05109-11;
RA Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C., Copeland A.,
RA Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A., Hammon N.M., Han S.,
RA Hauser L.J., Israni S., Kim E., Kyrpides N., Land M.L., Lapidus A.,
RA Larimer F.W., Lucas S., Pitluck S., Richardson P., Schmutz J., Tapia R.,
RA Thompson S., Tice H.N., Spain J.C., Gossett J.G., Mattes T.E.;
RT "Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete
RT Nocardioides sp. strain JS614.";
RL J. Bacteriol. 193:3399-3400(2011).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP000509; ABL83070.1; -; Genomic_DNA.
DR RefSeq; WP_011757001.1; NC_008699.1.
DR AlphaFoldDB; A1SMN5; -.
DR STRING; 196162.Noca_3570; -.
DR KEGG; nca:Noca_3570; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG2856; Bacteria.
DR HOGENOM; CLU_053651_1_1_11; -.
DR OMA; VDAFSCW; -.
DR OrthoDB; 9794834at2; -.
DR Proteomes; UP000000640; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.10.2910; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR PANTHER; PTHR43236:SF1; ANTITOXIN HIGA1; 1.
DR Pfam; PF12844; HTH_19; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000000640}.
FT DOMAIN 19..73
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 372 AA; 40696 MW; 19F2F09DEE186549 CRC64;
MTGPVREPAA GTDFDGTRLT VARRLRRKTK AQLARELGIS ATAIAQYEKG QARPSSGVLN
QICLSLGLPR EFFGVSRPLT LLPASGAHFR SLRATPATSR EQALAYGELS LELIDLISQY
VHLPPVRLPE VDIPDELTDD DIISAANGTR AAWNIAPGPV PSLVQTMEAH GIVVLRLPGD
TPHAVDAFST FTARRPLVFL SPAKNDKGRS RFDAAHELGH LVLHPDTEPG SKLVEQQAHR
FASEFLMPRD QIISDLPRRI DWPKFHELKR HWGVSLRALV YRAHALGRLS EASYRRANQQ
LSQWGLPEPG ELGPAETPTL LGLVQTTMRD SGLDLHDILA SSRIAPALAE EIVRAGSDNR
PTLAVAPSDA WN
//