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Database: UniProt
Entry: A1VUC8_POLNA
LinkDB: A1VUC8_POLNA
Original site: A1VUC8_POLNA 
ID   A1VUC8_POLNA            Unreviewed;       743 AA.
AC   A1VUC8;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   24-JAN-2024, entry version 70.
DE   SubName: Full=Regulatory protein, putative {ECO:0000313|EMBL:ABM39256.1};
GN   OrderedLocusNames=Pnap_3961 {ECO:0000313|EMBL:ABM39256.1};
OS   Polaromonas naphthalenivorans (strain CJ2).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Polaromonas.
OX   NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM39256.1, ECO:0000313|Proteomes:UP000000644};
RN   [1] {ECO:0000313|Proteomes:UP000000644}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX   PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA   Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT   "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT   tar-contaminated sediment, reveals physiological and metabolic versatility
RT   and evolution through extensive horizontal gene transfer.";
RL   Environ. Microbiol. 11:2253-2270(2009).
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DR   EMBL; CP000529; ABM39256.1; -; Genomic_DNA.
DR   AlphaFoldDB; A1VUC8; -.
DR   STRING; 365044.Pnap_3961; -.
DR   KEGG; pna:Pnap_3961; -.
DR   eggNOG; COG0348; Bacteria.
DR   eggNOG; COG3901; Bacteria.
DR   HOGENOM; CLU_013077_0_0_4; -.
DR   OMA; SHHEPVF; -.
DR   Proteomes; UP000000644; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0010181; F:FMN binding; IEA:InterPro.
DR   GO; GO:0045893; P:positive regulation of DNA-templated transcription; IEA:InterPro.
DR   InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR   InterPro; IPR007329; FMN-bd.
DR   InterPro; IPR011399; NosR.
DR   PANTHER; PTHR30224; ELECTRON TRANSPORT PROTEIN; 1.
DR   PANTHER; PTHR30224:SF4; ELECTRON TRANSPORT PROTEIN YCCM-RELATED; 1.
DR   Pfam; PF12801; Fer4_5; 2.
DR   PIRSF; PIRSF036354; NosR; 1.
DR   SMART; SM00900; FMN_bind; 1.
DR   SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000644};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        24..43
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        434..452
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        464..482
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        516..538
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        574..591
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        611..629
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          100..202
FT                   /note="FMN-binding"
FT                   /evidence="ECO:0000259|SMART:SM00900"
SQ   SEQUENCE   743 AA;  81457 MW;  8987571B0A7FF349 CRC64;
     MTSGKHAWTN DGQASGPDPV MRRVLPVLLT LLILFLLPGL LPAQAGVMTR EAMLKAFPAP
     LIVGEKEREL PVWPILKQDG TATPVVAYVF ESIDLAPIPG FSGTPFNLLV ALDAKGAFMD
     VRVLSQHEPV FLDGLGEGPM LDFVRQYKGR SLTQNIKIGN GGNTSNNSAK AGSANVYIDG
     VAKATASVRI LNQSLLSASL KVARARMGYA KGRDPDLIAR VRQGVFAAMD WDALTQAGLI
     TAKHFSNGDI EQAFKGSVGE GQDAEGRRAP GEPFIDLHVA YLSVPSVGRN LLDAQGWAYL
     QRRLEPGDHA LLVIGSGRYS FVGEDFVRGA IPDRLTLQQE SLPMEIRDLD LDATLKLPPA
     LQGAEWRVLR INAPAGLDPA QALNFKLRIT RSKGQIYPEQ VSRDFAFSAA LPEAYFEAAH
     ADNKTWHATW RERSGELALL LAGLGLLAWA LARPAWVSRS PARLAYFRTG YLLFTLLFIG
     WYAQGQLSVV NLTALVQALL AGRSLDFFMY DPMTVVLWGA VAVASVAWGR GTFCGWLCPF
     GALQELVSKL ANALGLRQRK VPDRVDAQLK KLKFVVLAVI LGVACVSVPW ADRLVEVEPF
     KTSITLLFNR AWPFVLWAVA LIVMSAFFYK SYCRYLCPLG AGMAVLGRLR RFDWLTRRAE
     CGQPCQRCRS ACAYQAIEKP GQIDYDECFQ CLDCVAIYSN EDLCVPLILK NRQPPAPPKP
     RVHIPITVLR HGEAGKRHEG ATP
//
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