ID A1VUC8_POLNA Unreviewed; 743 AA.
AC A1VUC8;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 24-JAN-2024, entry version 70.
DE SubName: Full=Regulatory protein, putative {ECO:0000313|EMBL:ABM39256.1};
GN OrderedLocusNames=Pnap_3961 {ECO:0000313|EMBL:ABM39256.1};
OS Polaromonas naphthalenivorans (strain CJ2).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas.
OX NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM39256.1, ECO:0000313|Proteomes:UP000000644};
RN [1] {ECO:0000313|Proteomes:UP000000644}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT tar-contaminated sediment, reveals physiological and metabolic versatility
RT and evolution through extensive horizontal gene transfer.";
RL Environ. Microbiol. 11:2253-2270(2009).
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DR EMBL; CP000529; ABM39256.1; -; Genomic_DNA.
DR AlphaFoldDB; A1VUC8; -.
DR STRING; 365044.Pnap_3961; -.
DR KEGG; pna:Pnap_3961; -.
DR eggNOG; COG0348; Bacteria.
DR eggNOG; COG3901; Bacteria.
DR HOGENOM; CLU_013077_0_0_4; -.
DR OMA; SHHEPVF; -.
DR Proteomes; UP000000644; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0010181; F:FMN binding; IEA:InterPro.
DR GO; GO:0045893; P:positive regulation of DNA-templated transcription; IEA:InterPro.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR007329; FMN-bd.
DR InterPro; IPR011399; NosR.
DR PANTHER; PTHR30224; ELECTRON TRANSPORT PROTEIN; 1.
DR PANTHER; PTHR30224:SF4; ELECTRON TRANSPORT PROTEIN YCCM-RELATED; 1.
DR Pfam; PF12801; Fer4_5; 2.
DR PIRSF; PIRSF036354; NosR; 1.
DR SMART; SM00900; FMN_bind; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000644};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 24..43
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 434..452
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 464..482
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 516..538
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 574..591
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 611..629
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 100..202
FT /note="FMN-binding"
FT /evidence="ECO:0000259|SMART:SM00900"
SQ SEQUENCE 743 AA; 81457 MW; 8987571B0A7FF349 CRC64;
MTSGKHAWTN DGQASGPDPV MRRVLPVLLT LLILFLLPGL LPAQAGVMTR EAMLKAFPAP
LIVGEKEREL PVWPILKQDG TATPVVAYVF ESIDLAPIPG FSGTPFNLLV ALDAKGAFMD
VRVLSQHEPV FLDGLGEGPM LDFVRQYKGR SLTQNIKIGN GGNTSNNSAK AGSANVYIDG
VAKATASVRI LNQSLLSASL KVARARMGYA KGRDPDLIAR VRQGVFAAMD WDALTQAGLI
TAKHFSNGDI EQAFKGSVGE GQDAEGRRAP GEPFIDLHVA YLSVPSVGRN LLDAQGWAYL
QRRLEPGDHA LLVIGSGRYS FVGEDFVRGA IPDRLTLQQE SLPMEIRDLD LDATLKLPPA
LQGAEWRVLR INAPAGLDPA QALNFKLRIT RSKGQIYPEQ VSRDFAFSAA LPEAYFEAAH
ADNKTWHATW RERSGELALL LAGLGLLAWA LARPAWVSRS PARLAYFRTG YLLFTLLFIG
WYAQGQLSVV NLTALVQALL AGRSLDFFMY DPMTVVLWGA VAVASVAWGR GTFCGWLCPF
GALQELVSKL ANALGLRQRK VPDRVDAQLK KLKFVVLAVI LGVACVSVPW ADRLVEVEPF
KTSITLLFNR AWPFVLWAVA LIVMSAFFYK SYCRYLCPLG AGMAVLGRLR RFDWLTRRAE
CGQPCQRCRS ACAYQAIEKP GQIDYDECFQ CLDCVAIYSN EDLCVPLILK NRQPPAPPKP
RVHIPITVLR HGEAGKRHEG ATP
//