ID A1VVS6_POLNA Unreviewed; 441 AA.
AC A1VVS6;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 75.
DE RecName: Full=Transposase, IS4 family {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=Pnap_4481 {ECO:0000313|EMBL:ABM39754.1};
OS Polaromonas naphthalenivorans (strain CJ2).
OG Plasmid pPNAP02 {ECO:0000313|EMBL:ABM39754.1,
OG ECO:0000313|Proteomes:UP000000644}.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas.
OX NCBI_TaxID=365044 {ECO:0000313|EMBL:ABM39754.1, ECO:0000313|Proteomes:UP000000644};
RN [1] {ECO:0000313|Proteomes:UP000000644}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RC PLASMID=Plasmid pPNAP02 {ECO:0000313|Proteomes:UP000000644};
RX PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT tar-contaminated sediment, reveals physiological and metabolic versatility
RT and evolution through extensive horizontal gene transfer.";
RL Environ. Microbiol. 11:2253-2270(2009).
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DR EMBL; CP000531; ABM39754.1; -; Genomic_DNA.
DR RefSeq; WP_011798211.1; NC_008758.1.
DR AlphaFoldDB; A1VVS6; -.
DR KEGG; pna:Pnap_4481; -.
DR eggNOG; COG3385; Bacteria.
DR HOGENOM; CLU_045115_0_1_4; -.
DR OrthoDB; 8617434at2; -.
DR Proteomes; UP000000644; Plasmid pPNAP02.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR038215; TN5-like_N_sf.
DR InterPro; IPR047768; Tn5p-like.
DR InterPro; IPR002559; Transposase_11.
DR InterPro; IPR003201; Transposase_Tn5.
DR InterPro; IPR014737; Transposase_Tn5-like_C.
DR InterPro; IPR014735; Transposase_Tn5-like_N.
DR NCBIfam; NF033590; transpos_IS4_3; 1.
DR PANTHER; PTHR37319; TRANSPOSASE; 1.
DR PANTHER; PTHR37319:SF1; TRANSPOSASE TN5 DIMERISATION DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01609; DDE_Tnp_1; 1.
DR Pfam; PF02281; Dimer_Tnp_Tn5; 1.
DR Pfam; PF14706; Tnp_DNA_bind; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:ABM39754.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT DOMAIN 3..59
FT /note="Transposase Tn5-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14706"
FT DOMAIN 195..343
FT /note="Transposase IS4-like"
FT /evidence="ECO:0000259|Pfam:PF01609"
FT DOMAIN 344..438
FT /note="Transposase Tn5 dimerisation"
FT /evidence="ECO:0000259|Pfam:PF02281"
SQ SEQUENCE 441 AA; 49761 MW; F6DAEC01BCACBF74 CRC64;
MGWAEHEFET IDLGDPRLNR RAVLLAERLG QKPGASIPGA CENWAETAAA YRFLRNEQVS
CEDVMAAHRQ ATVARMREHA VVLCLQDTTE LDYNGQATVG LGPLSYEAQR GLLLHPTYVV
TPEREPLGVM NAWTWAREFK QGDAPRGGVL ESVRWIESYE RIAEQASELP GTRHVCIGDR
ESDMLALLVM ARKMDHAADY LVRCQHNRVL PEGGKLWDEV MAGAPLGRIR FEMPAGRGRK
ARAVEQEVRA RRVLLPDRQG GELEVTCLIA SEVNAPAGAK PVVWRLLTNR VASTLQDAVE
LINWYRARWE IELFFLVLKE GCRVERLQLA DTERLQTALA LYMVIAWRIN RLMRLGRTLP
DLPADLLFEP DEWRAAFILN KKPVPRQTPP LNTVVRLIAQ RGGFLGRKHD GEPGARTIWL
GMQEIAVFVE GARYARQLND G
//
