ID A2YMD6_ORYSI Unreviewed; 457 AA.
AC A2YMD6;
DT 20-MAR-2007, integrated into UniProtKB/TrEMBL.
DT 20-MAR-2007, sequence version 1.
DT 24-JAN-2024, entry version 79.
DE RecName: Full=Prokaryotic-type class I peptide chain release factors domain-containing protein {ECO:0000259|PROSITE:PS00745};
GN ORFNames=OsI_26391 {ECO:0000313|EMBL:EAZ04247.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EAZ04247.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EAZ04247.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000256|ARBA:ARBA00010835}.
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DR EMBL; CM000132; EAZ04247.1; -; Genomic_DNA.
DR AlphaFoldDB; A2YMD6; -.
DR STRING; 39946.A2YMD6; -.
DR EnsemblPlants; BGIOSGA024138-TA; BGIOSGA024138-PA; BGIOSGA024138.
DR Gramene; BGIOSGA024138-TA; BGIOSGA024138-PA; BGIOSGA024138.
DR HOGENOM; CLU_036856_6_2_1; -.
DR OMA; YVFHPYQ; -.
DR Proteomes; UP000007015; Chromosome 7.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:InterPro.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.70.1660; -; 1.
DR Gene3D; 1.20.58.410; Release factor; 1.
DR HAMAP; MF_00094; Rel_fac_2; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004374; PrfB.
DR NCBIfam; TIGR00020; prfB; 1.
DR PANTHER; PTHR43116; PEPTIDE CHAIN RELEASE FACTOR 2; 1.
DR PANTHER; PTHR43116:SF3; RF_PROK_I DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; Release factor; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000007015}.
FT DOMAIN 326..342
FT /note="Prokaryotic-type class I peptide chain release
FT factors"
FT /evidence="ECO:0000259|PROSITE:PS00745"
FT COILED 98..196
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 457 AA; 50740 MW; E0F122141057F5A9 CRC64;
MIDCPRLLLA AARASPYPSS AAHRRVCTAG VPPVPVYCRV SRRRRLGSTQ CNLHPLGQEA
NRALQKVRRL PNGPCRKLVT DFYALRKDVE LALARVGEVR QSAGLDQLEE EIASLEKKSA
DSSLWDDPSK AQEILVALTE VKDRVKLLND LKSQVEEAET IVKLTEELDS IDTGLLEEAS
KIIKALNKAL DNFEMTQLLS GPYDKEGAVI NITAGAGGTD AQDWADMLLR MYVRWGEKQR
YKTRVVEKSP GEEAGIKSAT IELEGRYAYG YLSGEKGTHR IVRQSPFNAK GLRQTSFAGV
EVMPLLPEES MDVEIPEEDL EISFTRAGGK GGQNVNKVET AVRMVHIPTG IAVRCTEERS
QLANKIKALS RLKAKLLVIA EEQRASEIKQ IRGDAVKAEW GQQIRNYVFH PYKLVKDVRT
ACETSDITGV MDGELDTFIR AYLKYKLSAA AEEQSVK
//
