ID A3HVP3_9BACT Unreviewed; 574 AA.
AC A3HVP3;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 03-APR-2007, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=ALPR1_03200 {ECO:0000313|EMBL:EAZ82215.1};
OS Algoriphagus machipongonensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Algoriphagus.
OX NCBI_TaxID=388413 {ECO:0000313|EMBL:EAZ82215.1, ECO:0000313|Proteomes:UP000003919};
RN [1] {ECO:0000313|EMBL:EAZ82215.1, ECO:0000313|Proteomes:UP000003919}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PR1 {ECO:0000313|EMBL:EAZ82215.1,
RC ECO:0000313|Proteomes:UP000003919};
RX PubMed=21183675; DOI=10.1128/JB.01421-10;
RA Alegado R.A., Ferriera S., Nusbaum C., Young S.K., Zeng Q., Imamovic A.,
RA Fairclough S.R., King N.;
RT "Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a
RT colony-forming choanoflagellate.";
RL J. Bacteriol. 193:1485-1486(2011).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAZ82215.1}.
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DR EMBL; AAXU02000001; EAZ82215.1; -; Genomic_DNA.
DR RefSeq; WP_008198328.1; NZ_CM001023.1.
DR AlphaFoldDB; A3HVP3; -.
DR STRING; 388413.ALPR1_03200; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_2_10; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000003919; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EAZ82215.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:EAZ82215.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000003919}.
FT DOMAIN 80..229
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 317..439
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 456..570
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 574 AA; 64948 MW; 855597AA867DDD30 CRC64;
MEYVWKQKPR ATGTLVEQLG REINVNPILA NMLINRGVDN FDTAKNYFRP SLSKLHDPFL
MKDMTEAIER IEKAIQQDEK ILVYGDYDVD GTTAVALVYS YLQSFYSKVD FYIPDRYKEG
YGISSKGVRF AAENNYKLII ALDCGIKAIE KVALAKELGV DFIICDHHTP GDELPQAVAV
LDAKRKDCEY PYKELSGAGV GFKLIQAHAK IREIEESALY AYLDLLVVSI AADIVPITGE
NRILAYYGLE RINNTPRPGL KALMLSAKIE KEIGISDIVF KIGPRINASG RLEHAKASVE
LLISTDLDLA IERAKVVDEV NTTRRNFDEN ITKEAFEMIA EREASNEWNS TVLFKEDWHK
GVIGIVASRC IEKYYRPTII LTESNGKATG SARSVVDFNI YEAISECAGL LDQFGGHKYA
AGLTLSVDKV EDFQIMFEKV VKSRIEEVHR KPVIEIDDEL LLDQINYKFY NILKQMAPFG
PGNTEPVFRI SQAYAENVII LKDKHLRFNI VQDGQVTKPV CLGFGLADKT KDPDHTIVKM
LQGKMRFDIV AEMRENFFRD KSSLQLYVKD IKFD
//
