ID A3LZB0_PICST Unreviewed; 530 AA.
AC A3LZB0;
DT 03-APR-2007, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2007, sequence version 2.
DT 27-MAR-2024, entry version 79.
DE RecName: Full=Matrin-type domain-containing protein {ECO:0000259|PROSITE:PS50171};
GN ORFNames=PICST_33476 {ECO:0000313|EMBL:ABN68124.2};
OS Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
OS Y-11545) (Yeast) (Pichia stipitis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Scheffersomyces.
OX NCBI_TaxID=322104 {ECO:0000313|EMBL:ABN68124.2, ECO:0000313|Proteomes:UP000002258};
RN [1] {ECO:0000313|EMBL:ABN68124.2, ECO:0000313|Proteomes:UP000002258}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545
RC {ECO:0000313|Proteomes:UP000002258};
RX PubMed=17334359; DOI=10.1038/nbt1290;
RA Jeffries T.W., Grigoriev I.V., Grimwood J., Laplaza J.M., Aerts A.,
RA Salamov A., Schmutz J., Lindquist E., Dehal P., Shapiro H., Jin Y.S.,
RA Passoth V., Richardson P.M.;
RT "Genome sequence of the lignocellulose-bioconverting and xylose-fermenting
RT yeast Pichia stipitis.";
RL Nat. Biotechnol. 25:319-326(2007).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SF3A3 family.
CC {ECO:0000256|ARBA:ARBA00008776}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000501; ABN68124.2; -; Genomic_DNA.
DR RefSeq; XP_001386153.2; XM_001386116.1.
DR AlphaFoldDB; A3LZB0; -.
DR STRING; 322104.A3LZB0; -.
DR GeneID; 4840790; -.
DR KEGG; pic:PICST_33476; -.
DR eggNOG; KOG2636; Eukaryota.
DR HOGENOM; CLU_027160_1_1_1; -.
DR InParanoid; A3LZB0; -.
DR OMA; GPKAFQK; -.
DR OrthoDB; 5483967at2759; -.
DR Proteomes; UP000002258; Chromosome 7.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR000690; Matrin/U1-C_Znf_C2H2.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR031590; PRP9_N.
DR InterPro; IPR031774; SF3A3_dom.
DR InterPro; IPR024598; SF3a60/Prp9_C.
DR InterPro; IPR022755; Znf_C2H2_jaz.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR12786:SF2; SPLICING FACTOR 3A SUBUNIT 3; 1.
DR PANTHER; PTHR12786; SPLICING FACTOR SF3A-RELATED; 1.
DR Pfam; PF16958; PRP9_N; 1.
DR Pfam; PF16837; SF3A3; 1.
DR Pfam; PF11931; SF3a60_Prp9_C; 1.
DR Pfam; PF12171; zf-C2H2_jaz; 1.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SMART; SM00451; ZnF_U1; 2.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS50171; ZF_MATRIN; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000002258};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 433..464
FT /note="Matrin-type"
FT /evidence="ECO:0000259|PROSITE:PS50171"
FT REGION 383..405
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 530 AA; 61299 MW; FDD6EE47EAE05CDF CRC64;
MEMLQRNVAR SILEELDVIE LESSRRFRKD PLLYPQNENK EKLQIVRTKR PQKEVKLQQH
ELAVFQQKYK KHCNSLRNHT ANDSDIIQSI LGTLDDSKAT FSNFDSALAQ IQEKHNKTNN
GEIEVAESIR NMYTMFSSIL FSGEESVLLD DDIKRVRKEG KEKTKVKRKH IISITASHLD
PDGIYSTEEV YGKYLDLTKF HEIYRNQTSS NVSYLEYLKV FDIFPYAESF RSSSIYLQYL
RDLSEYLVDF VSRTEPLQNF NEVFESIKKS YSPKEEPATR DGVENESGEV YCSVCQKVFA
KISVYQGHLN GKKHKKNAKE LQTATPKESI ISESDLQEHI NTELGKFLSN YKEATIQNTE
RKSAMTERER LIENTTIVGD ESDYTTVYDS SSDSGNDSSD EEENENLKHL PLGADGKPIP
FWLYKLQGLH KTYNCEICGN VTYKGRVTFE KHFSAPKHQY GLKCLGITEQ FVSYFKDIIS
INEAQDLWKR LKRDKRIKEG DIENAVEVED AEGNVMSEKD YLDLKKQGLL
//
