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Database: UniProt
Entry: A3Q9N1_SHELP
LinkDB: A3Q9N1_SHELP
Original site: A3Q9N1_SHELP 
ID   A3Q9N1_SHELP            Unreviewed;       640 AA.
AC   A3Q9N1;
DT   17-APR-2007, integrated into UniProtKB/TrEMBL.
DT   17-APR-2007, sequence version 1.
DT   24-JAN-2024, entry version 90.
DE   SubName: Full=Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABO22179.1};
DE   Flags: Precursor;
GN   OrderedLocusNames=Shew_0307 {ECO:0000313|EMBL:ABO22179.1};
OS   Shewanella loihica (strain ATCC BAA-1088 / PV-4).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=323850 {ECO:0000313|EMBL:ABO22179.1, ECO:0000313|Proteomes:UP000001558};
RN   [1] {ECO:0000313|EMBL:ABO22179.1, ECO:0000313|Proteomes:UP000001558}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-1088 / PV-4 {ECO:0000313|Proteomes:UP000001558};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G.,
RA   Fredrickson J., Tiedje J., Richardson P.;
RT   "Complete sequence of Shewanella loihica PV-4.";
RL   Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000606; ABO22179.1; -; Genomic_DNA.
DR   RefSeq; WP_011864113.1; NC_009092.1.
DR   AlphaFoldDB; A3Q9N1; -.
DR   STRING; 323850.Shew_0307; -.
DR   KEGG; slo:Shew_0307; -.
DR   eggNOG; COG2199; Bacteria.
DR   eggNOG; COG2200; Bacteria.
DR   eggNOG; COG2770; Bacteria.
DR   HOGENOM; CLU_000445_109_1_6; -.
DR   OMA; LPNRQYM; -.
DR   OrthoDB; 5894408at2; -.
DR   Proteomes; UP000001558; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd06225; HAMP; 1.
DR   Gene3D; 3.30.110.200; -; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 6.10.340.10; -; 1.
DR   Gene3D; 3.20.20.450; EAL domain; 1.
DR   Gene3D; 6.20.270.20; LapD/MoxY periplasmic domain; 1.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR003660; HAMP_dom.
DR   InterPro; IPR032244; LapD_MoxY_N.
DR   InterPro; IPR042461; LapD_MoxY_peri_C.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR   PANTHER; PTHR33121:SF75; CYCLIC DI-GMP PHOSPHODIESTERASE PDEL-RELATED; 1.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF00672; HAMP; 1.
DR   Pfam; PF16448; LapD_MoxY_N; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00304; HAMP; 1.
DR   SUPFAM; SSF141868; EAL domain-like; 1.
DR   SUPFAM; SSF158472; HAMP domain-like; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50885; HAMP; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001558};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        6..27
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        152..175
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          172..224
FT                   /note="HAMP"
FT                   /evidence="ECO:0000259|PROSITE:PS50885"
FT   DOMAIN          263..394
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
FT   DOMAIN          403..640
FT                   /note="EAL"
FT                   /evidence="ECO:0000259|PROSITE:PS50883"
SQ   SEQUENCE   640 AA;  73458 MW;  83680FF9FAA9BC72 CRC64;
     MTLFRQIYSL LFGLFLVVVI SLAYVQFTET QSFLTKQMES DLNNTSHSLG IMLVPDLEAG
     DIVGAETLIN VIFEGGYYQQ VKLTWLVDGK QQVWENDVKI EGVPQWFIDL GFFETIKRES
     TITSGWIQLA NLEITAHPGF GYNELWRTLT NAIIVISILF LLAIMLARFG LTWILRPLHE
     IAEHAAEIAQ RKFGPDMAIP KTSELKSVVE AFNSMSHQLK QIFSSLDEEV TELRKKNLVD
     QVSKLPNRQY MMGRLNSWLS EPNNGSLMMA KFDWLEEVHS KYGYQVRDET IRLLSEKMQE
     QLDEIAPSVI ARIAAYEFAF LITSAEQEQS SKYLHTLIRT VNQEISKAGC KPNEQFAIGI
     AQRTDNMTVS DILAQTDNAL QKAIADNKVF HWFESNEKQL YTREQWREHL SAAISSKQFQ
     FKWQPVYHTN KDEVVQRELY CQLTIGDKEI HAGQFMPYVE LLSLGSMLDR CLIETIVDNG
     LLERNYEPIA INLTFNSLSD TTFHQWLNKF LRNTPLAQRI VFDIPEAGVY SDPDACQALC
     NIIRDNGAHF GIDHFGRQFG SMSYLQNLRP SYVKLDQSFA YYDENEHNSE LCRALVNVAR
     GLDIQIIVTG IQEQPQLARF EPLKANAYMG YIYPPTRVEL
//
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