ID A4RR89_OSTLU Unreviewed; 1175 AA.
AC A4RR89;
DT 15-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 15-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 94.
DE RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=OSTLU_805 {ECO:0000313|EMBL:ABO94150.1};
OS Ostreococcus lucimarinus (strain CCE9901).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Ostreococcus.
OX NCBI_TaxID=436017 {ECO:0000313|EMBL:ABO94150.1, ECO:0000313|Proteomes:UP000001568};
RN [1] {ECO:0000313|EMBL:ABO94150.1, ECO:0000313|Proteomes:UP000001568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCE9901 {ECO:0000313|EMBL:ABO94150.1,
RC ECO:0000313|Proteomes:UP000001568};
RX PubMed=17460045; DOI=10.1073/pnas.0611046104;
RA Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N.,
RA Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R.,
RA Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K.,
RA Manuell A., Tai V., Vallon O., Piganeau G., Jancek S., Heijde M.,
RA Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I.,
RA Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D.,
RA Van de Peer Y., Moreau H., Grigoriev I.V.;
RT "The tiny eukaryote Ostreococcus provides genomic insights into the paradox
RT of plankton speciation.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007).
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DR EMBL; CP000581; ABO94150.1; -; Genomic_DNA.
DR RefSeq; XP_001415858.1; XM_001415821.1.
DR AlphaFoldDB; A4RR89; -.
DR STRING; 436017.A4RR89; -.
DR EnsemblPlants; ABO94150; ABO94150; OSTLU_805.
DR GeneID; 5000002; -.
DR Gramene; ABO94150; ABO94150; OSTLU_805.
DR KEGG; olu:OSTLU_805; -.
DR eggNOG; KOG0947; Eukaryota.
DR HOGENOM; CLU_002902_1_4_1; -.
DR OMA; CGSDITR; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000001568; Chromosome 1.
DR GO; GO:0055087; C:Ski complex; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:EnsemblPlants.
DR GO; GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IEA:EnsemblPlants.
DR GO; GO:1904278; P:positive regulation of wax biosynthetic process; IEA:EnsemblPlants.
DR GO; GO:0016441; P:post-transcriptional gene silencing; IEA:EnsemblPlants.
DR GO; GO:0006813; P:potassium ion transport; IEA:EnsemblPlants.
DR GO; GO:0035864; P:response to potassium ion; IEA:EnsemblPlants.
DR GO; GO:0000292; P:RNA fragment catabolic process; IEA:EnsemblPlants.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF24; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH11; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001568};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 223..378
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 531..699
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 121..150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 449..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..22
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..150
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABO94150.1"
FT NON_TER 1175
FT /evidence="ECO:0000313|EMBL:ABO94150.1"
SQ SEQUENCE 1175 AA; 129380 MW; D4DD314E4CCCE510 CRC64;
AGDSSSLARS PAPQSDFVRG SFSQVPFTPG GEGWDAAARE SAAKRMELAS RAGKAWLEEF
EAGTYLSAST LPNTLHGMRE MFDLDSGMEQ MELELEKLTV MDDEELPMSY DDLFIDALRG
AVRPEESSSE EDDTEDETED ETEEDGEAVD EVTLEGEAEV EALLNGTKSI IAARRRSKSR
KKKGETWAVM ERFDDVQEAY RREVPEPAHD FPFELDLFQK EAIVHLEKSE NVFVAAHTSA
GKTVVAEYAF ALATKHCTRA IYTSPIKTIS NQKFRDFGKM FDVGLLTGDV SIKPEAACLI
MTTEILRSML YRGADLIRDV EWVIFDEVHY VNDAERGVVW EEVIIMLPAH VGLILLSATV
PNVFEFADWV GRTKRKKIFV TGTKKRPVPL EHCIYFGGDK EKDFYKVGEH EAFLPTGYKV
ASDAHKKKLL GNKTTTATPA NAQAAKQTAL AGRGGRGGAQ QGRGGRVGGR GGTQNVTGGR
GSSFGPNAGR DKNMWVELIR NLERRELLPM VVFAFSKKRC DTLVDSLTSM DLTSSSEKHE
IHVFCERALS RLSVTDRKLP QVLRVRELLR RGLGVHHAGL LPIVKEIVEM LFCRGLLKVL
YCTETFAMGV NAPARCVCFQ SLRKHDGQDF RGLLSGEYTQ MAGRAGRRGL DTVGTVILAA
WENFPPELEL RQLLSGQATK LQSQFRLTYG MILNLMRVED LRVEDMLARS FAEFHAQRSV
IDRRGDLAID TAALRKVESL MQTEAQFSPD EWQKAVHWDD HAREIARSVE HVREAIMTSR
GAQNALSPGR VLLVAPEGEG GESVDGLPRG GVAKHCVLLR VVTSATNGKS FVRGGTTSNK
MPDGLPWFRQ AGGIDYIVAS VPETAILAIT TSRLSVEADA ILDGSGDVAA TSRALLSMEK
LSSETSFEAL HPLKDLKIQD IVTVEACQHH ADLVKSLPPR PVASAQKLRE WSALLRAKHV
LTSRVAELEF GLSDANLLQM PDFEARVAVL QRMGYLDENR TVTLKGRVAC EIATGDELVG
TEIIFAGVLT DIPSEEAVAL LAALVFQEKN ASPPNLEGSL KAACDRAKEL AFAAGEIQMA
HGLPIAPDEF VETTMRFGLS EVVYEWARGT PFADICQLTD VQEGSVVRTI VRLDEMCRDV
RNAARIMGDS TLFAKMEEAS AAIKRDIVFS ASLYV
//
