ID A4RSB2_OSTLU Unreviewed; 249 AA.
AC A4RSB2;
DT 15-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 15-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE RecName: Full=RNA-binding S4 domain-containing protein {ECO:0000259|SMART:SM00363};
DE Flags: Fragment;
GN ORFNames=OSTLU_6806 {ECO:0000313|EMBL:ABO94569.1};
OS Ostreococcus lucimarinus (strain CCE9901).
OC Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales;
OC Bathycoccaceae; Ostreococcus.
OX NCBI_TaxID=436017 {ECO:0000313|EMBL:ABO94569.1, ECO:0000313|Proteomes:UP000001568};
RN [1] {ECO:0000313|EMBL:ABO94569.1, ECO:0000313|Proteomes:UP000001568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCE9901 {ECO:0000313|EMBL:ABO94569.1,
RC ECO:0000313|Proteomes:UP000001568};
RX PubMed=17460045; DOI=10.1073/pnas.0611046104;
RA Palenik B., Grimwood J., Aerts A., Rouze P., Salamov A., Putnam N.,
RA Dupont C., Jorgensen R., Derelle E., Rombauts S., Zhou K., Otillar R.,
RA Merchant S.S., Podell S., Gaasterland T., Napoli C., Gendler K.,
RA Manuell A., Tai V., Vallon O., Piganeau G., Jancek S., Heijde M.,
RA Jabbari K., Bowler C., Lohr M., Robbens S., Werner G., Dubchak I.,
RA Pazour G.J., Ren Q., Paulsen I., Delwiche C., Schmutz J., Rokhsar D.,
RA Van de Peer Y., Moreau H., Grigoriev I.V.;
RT "The tiny eukaryote Ostreococcus provides genomic insights into the paradox
RT of plankton speciation.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:7705-7710(2007).
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DR EMBL; CP000582; ABO94569.1; -; Genomic_DNA.
DR RefSeq; XP_001416276.1; XM_001416239.1.
DR AlphaFoldDB; A4RSB2; -.
DR EnsemblPlants; ABO94569; ABO94569; OSTLU_6806.
DR GeneID; 5000322; -.
DR Gramene; ABO94569; ABO94569; OSTLU_6806.
DR KEGG; olu:OSTLU_6806; -.
DR eggNOG; ENOG502QQ1B; Eukaryota.
DR HOGENOM; CLU_024979_1_2_1; -.
DR OMA; YHKPKGE; -.
DR OrthoDB; 67602at2759; -.
DR Proteomes; UP000001568; Chromosome 2.
DR GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProt.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.30.70.1560; Alpha-L RNA-binding motif; 1.
DR Gene3D; 3.30.70.580; Pseudouridine synthase I, catalytic domain, N-terminal subdomain; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR042092; PsdUridine_s_RsuA/RluB/E/F_cat.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR InterPro; IPR020094; TruA/RsuA/RluB/E/F_N.
DR PANTHER; PTHR47683; PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR47683:SF2; S4 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR PROSITE; PS50889; S4; 1.
PE 4: Predicted;
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Reference proteome {ECO:0000313|Proteomes:UP000001568};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT DOMAIN 7..67
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABO94569.1"
FT NON_TER 249
FT /evidence="ECO:0000313|EMBL:ABO94569.1"
SQ SEQUENCE 249 AA; 27971 MW; A623A24C6C8A95EB CRC64;
WEDDELERVS KILARRGTCS RREAERLIED GRVLVDGETI ELGFKARANA RIEITGEGTR
WLREKLTVIV NKPPGYVSNL PAEGEIAAAA CVEPRNAWMR AMEGTPMDDL KRVTRDVSSF
NVCGRLDKDS RGLLILTEDG ALARSVIGGN GVLKKYVVTT DADVRESHMR SLNGRVQLDG
VELLPMNVQR LGHGSRTLEF NLREGKNRQI RRVCEKFGLR VVDLHRVQIG DVQIGDLPEG
AWRLMSERE
//
