ID A4XPC4_PSEMY Unreviewed; 252 AA.
AC A4XPC4;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 85.
DE RecName: Full=HTH-type transcriptional repressor AllR {ECO:0000256|ARBA:ARBA00040379};
DE AltName: Full=Negative regulator of allantoin and glyoxylate utilization operons {ECO:0000256|ARBA:ARBA00042627};
GN OrderedLocusNames=Pmen_0417 {ECO:0000313|EMBL:ABP83190.1};
OS Pseudomonas mendocina (strain ymp).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=399739 {ECO:0000313|EMBL:ABP83190.1};
RN [1] {ECO:0000313|EMBL:ABP83190.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ymp {ECO:0000313|EMBL:ABP83190.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Kiss H., Brettin T., Detter J.C., Bruce D., Han C.,
RA Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.,
RA Hersman L., Dubois J., Maurice P., Richardson P.;
RT "Complete sequence of Pseudomonas mendocina ymp.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000680; ABP83190.1; -; Genomic_DNA.
DR AlphaFoldDB; A4XPC4; -.
DR STRING; 399739.Pmen_0417; -.
DR KEGG; pmy:Pmen_0417; -.
DR PATRIC; fig|399739.8.peg.427; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_6_2_6; -.
DR OrthoDB; 9807558at2; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00090; HTH_ARSR; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011991; ArsR-like_HTH.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 9..70
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 71..252
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 252 AA; 27839 MW; BDBFD7F0B910B10F CRC64;
MSENKKEKGS SITRVLEIIE MLSQAQRPMA PADIAHYLDI PKPSIHRLLQ QLEADGFLQV
DLRGLWGPGA KLHGLAWAVL RNQRFKNERM AILHELAGKI GETCGISIPH GLDMVYADRV
HANWPLQIHL PEGSQVPIWC TASGKLYLSS FPRAQRDRII SKLPLTRMTC NTLCTLDALK
AELDRTCERG MGVDNEEFVD GMVACSVPVA DDEGVLLACL FVHAPVIRVS AEQLMAFKPL
LTDAAAELAN LL
//
