ID A4YC79_SHEPC Unreviewed; 1216 AA.
AC A4YC79;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 95.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) {ECO:0000313|EMBL:ABP77562.1};
GN OrderedLocusNames=Sputcn32_3856 {ECO:0000313|EMBL:ABP77562.1};
OS Shewanella putrefaciens (strain CN-32 / ATCC BAA-453).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=319224 {ECO:0000313|EMBL:ABP77562.1};
RN [1] {ECO:0000313|EMBL:ABP77562.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CN-32 {ECO:0000313|EMBL:ABP77562.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Fredrickson J.,
RA Tiedje J., Richardson P.;
RT "Complete sequence of Shewanella putrefaciens CN-32.";
RL Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP000681; ABP77562.1; -; Genomic_DNA.
DR AlphaFoldDB; A4YC79; -.
DR SMR; A4YC79; -.
DR STRING; 319224.Sputcn32_3856; -.
DR KEGG; spc:Sputcn32_3856; -.
DR eggNOG; COG3614; Bacteria.
DR eggNOG; COG3829; Bacteria.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_59_6; -.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.350; CHASE domain; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR006189; CHASE_dom.
DR InterPro; IPR042240; CHASE_sf.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR007895; MASE1.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF03924; CHASE; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF05231; MASE1; 1.
DR Pfam; PF13426; PAS_9; 2.
DR SMART; SM01079; CHASE; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50839; CHASE; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..39
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 45..61
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 68..86
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 129..152
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 164..183
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 195..213
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 483..507
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 257..415
FT /note="CHASE"
FT /evidence="ECO:0000259|PROSITE:PS50839"
FT DOMAIN 542..585
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 664..710
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 737..789
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 821..953
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 962..1216
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 1216 AA; 135545 MW; E6F3ED64BA70685A CRC64;
MHISIKGLNI KSFTHSLRVN FLITLAYVVV GKIGLMIALP PGYSAAIWPA AGIAIAACIL
WKEYTPWIGV FIGSFLINAN MGGFVHWSWL PVVIAMGSSI QAILAAKMMS RIDHLVTLDS
PHTVIKSCLG LALTCIVATV CGNLALVISG TIPQSDFLES LVNWWMGDLL GAIIFIPLTM
LVFDKRDIWR SRRIQTGIPM FVGFLCCVGI YSYSDMNQRQ QLQDKFEIQS NAIISRIEGF
QDANLQRIIA LASLFDNSEQ VSVDEFIQFG KRTLLPTDGV HAWVWAPLVA ATEQESFEIA
ASAAISGAYN VKRPQNWQVN TDGWLVPVMY IQPLANHEAV LGMDLNSEPI RAAAIAKVRT
TQAPVMTAKV QLAPDFTGPS GTLLFAPVFD RLGEIAGFCT AVIDLQQIIN EVEQVQGLQW
KLIDMSAGGS LLYSNTDKDF PIFSDYIFSD KNGHFFQANL MFADRHWHIV LYQSYTMLMG
DTFSLSLLML LLAFTTCAVI GGLTLVYSGE HHRIAEKVQE KTMALSKEIA RSQAFQATLV
ESEQRYRNLF DKAPVGHVLK QVDNGRFVAI NQAFTDITGY SLDELNQLDP WELTSKRYQL
SEAEQLERLK QTRRYGPYQK HYLHKNGQSV AVRLNGALVT GANGEQLVLF IVEDITEQER
TVARVNLLAQ VFQQSGEGIT IIDANDIIVD VNTAFSQITG YSREDIIGKN CRFLEAKRTD
KSIDPQVRAA LEQTGFWQGE VWDRHKDGYD FPKWLMMSVV RDESGAVSHY IGSFTDISER
KMSEERIHFL AHHDSLTLLP NRLSLQSSLE IVFGEALASQ SQIAVMFIDM DHFKNINDTL
GHHVGDQLLL EVARRLKNIV DNNEIVARLG GDEFVVVLSD TNHDEVASLA EALRSGLSQT
YIIDNNSLHS SPSIGISLFP TDGNTVEALM KNADMAMYRA KAAGRNNYQF FTAAMNTLIT
ERQHIETGLR QVLANEELQL HYQPQIDIRT GQVVSVEALV RWQHPEFGLI SPDRFISIAE
EIDMIIPIGQ WVLETAMAQL AAWRAAGATR LRMAVNLSAH QLRKDTIVAD ITNVLLKHQL
GKGALELEIT ESVAMQYPEQ NARLLAELRQ HGIELAIDDF GTGYSSLSYL KLLPLDRLKL
DRSFVKDIET DPNDAAISAA TISMSHELGL TVVAEGVENE AQLVLLSSMG CDLVQGYYFS
KPLPAEECFR FIQRNL
//
