ID A4YMD7_BRASO Unreviewed; 423 AA.
AC A4YMD7;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 102.
DE SubName: Full=RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CAL75063.1};
GN OrderedLocusNames=BRADO1156 {ECO:0000313|EMBL:CAL75063.1};
OS Bradyrhizobium sp. (strain ORS 278).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=114615 {ECO:0000313|EMBL:CAL75063.1, ECO:0000313|Proteomes:UP000001994};
RN [1] {ECO:0000313|EMBL:CAL75063.1, ECO:0000313|Proteomes:UP000001994}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ORS 278 {ECO:0000313|Proteomes:UP000001994};
RX PubMed=17540897; DOI=10.1126/science.1139548;
RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C.,
RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L.,
RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z.,
RA Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E.,
RA Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G.,
RA Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
RT "Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
RL Science 316:1307-1312(2007).
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DR EMBL; CU234118; CAL75063.1; -; Genomic_DNA.
DR RefSeq; WP_011924306.1; NC_009445.1.
DR AlphaFoldDB; A4YMD7; -.
DR STRING; 114615.BRADO1156; -.
DR KEGG; bra:BRADO1156; -.
DR eggNOG; COG4941; Bacteria.
DR HOGENOM; CLU_035311_1_0_5; -.
DR OrthoDB; 9780299at2; -.
DR Proteomes; UP000001994; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR47756:SF1; BLL0085 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001994}.
FT DOMAIN 15..77
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 114..164
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 183..284
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 423 AA; 46542 MW; C1BAA0AF25F84D98 CRC64;
MTDVAWIDAA LTSARPQAVG ALLRYFRDLD TAEEAFQNAC LRALKSWPQN GPPRDPAAWL
IMVGRNAAID DVRRSRREQP LPEDEAISDL GDAESAVVDR LDGSHYRDDI LRLLFICCHK
ELPATQQIAL ALRVVSGLTV KQIARAFLVS DAAMEQRITR AKARVAQANV PFETPGAVER
AERLTAVAAM IYLIFNEGYS SSGETAALRR KLSEEAIRLA RLLLRLFPGE PEIMGLTALL
LLQHARSAAR FDAEGLPILL EDQDRTLWNQ PMIAEGLALI DKAMRHRRSG PYQIQAAIAA
LHARAARPEE TDWTQIDLLY GALEVVQPSP VVTLNRAVAV SKVRGAQAAL DLIAPLEGRL
ANYFYFFGVR GALLMQLGRH DEARAAFDRA IALAHSSAEA AHIRMQLDRL MRDSAAAPAQ
AGR
//
