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Database: UniProt
Entry: A4YNF3_BRASO
LinkDB: A4YNF3_BRASO
Original site: A4YNF3_BRASO 
ID   A4YNF3_BRASO            Unreviewed;       258 AA.
AC   A4YNF3;
DT   29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT   29-MAY-2007, sequence version 1.
DT   24-JAN-2024, entry version 76.
DE   SubName: Full=Putative Transcriptional regulator, IclR family {ECO:0000313|EMBL:CAL75429.1};
GN   OrderedLocusNames=BRADO1546 {ECO:0000313|EMBL:CAL75429.1};
OS   Bradyrhizobium sp. (strain ORS 278).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Bradyrhizobium.
OX   NCBI_TaxID=114615 {ECO:0000313|EMBL:CAL75429.1, ECO:0000313|Proteomes:UP000001994};
RN   [1] {ECO:0000313|EMBL:CAL75429.1, ECO:0000313|Proteomes:UP000001994}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ORS 278 {ECO:0000313|Proteomes:UP000001994};
RX   PubMed=17540897; DOI=10.1126/science.1139548;
RA   Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C.,
RA   Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L.,
RA   Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z.,
RA   Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E.,
RA   Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G.,
RA   Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
RT   "Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
RL   Science 316:1307-1312(2007).
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DR   EMBL; CU234118; CAL75429.1; -; Genomic_DNA.
DR   AlphaFoldDB; A4YNF3; -.
DR   STRING; 114615.BRADO1546; -.
DR   KEGG; bra:BRADO1546; -.
DR   eggNOG; COG1414; Bacteria.
DR   HOGENOM; CLU_062618_4_0_5; -.
DR   OMA; TGESAFF; -.
DR   Proteomes; UP000001994; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR   InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR   PANTHER; PTHR30136:SF24; HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLR; 1.
DR   Pfam; PF09339; HTH_IclR; 1.
DR   Pfam; PF01614; IclR; 1.
DR   SMART; SM00346; HTH_ICLR; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS51077; HTH_ICLR; 1.
DR   PROSITE; PS51078; ICLR_ED; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001994};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          1..56
FT                   /note="HTH iclR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51077"
FT   DOMAIN          57..240
FT                   /note="IclR-ED"
FT                   /evidence="ECO:0000259|PROSITE:PS51078"
SQ   SEQUENCE   258 AA;  27251 MW;  A1F718AC3A937866 CRC64;
     MRLLRVLAEG DPKGLRLKDI AEAAGCSQPT AHRMLQDLAA EGFAEQAAGK RYRLALDFYV
     IAARAGQASG LRDAARPALL RLSATLSDTI FLLVRNGFDA VCLDRVEGPF PIRSFTGDIG
     GKVPLGLGQG SLAILANLPE DEQEAVIRFN IPRLLDRGFL DEASLRSAMA LARAQGWVNT
     STGLIPGMAG VGVPVLDAQG HAVAALSVGT LAERLNADRL PHVVKILQSE AHALAGKLNP
     FDVALRYPSR SLSTIGGS
//
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