ID A4Z006_BRASO Unreviewed; 691 AA.
AC A4Z006;
DT 29-MAY-2007, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2007, sequence version 1.
DT 27-MAR-2024, entry version 102.
DE SubName: Full=Glycosyl hydrolase (Glycogen debranching enzyme) {ECO:0000313|EMBL:CAL79482.1};
DE EC=3.2.1.- {ECO:0000313|EMBL:CAL79482.1};
GN Name=glgX {ECO:0000313|EMBL:CAL79482.1};
GN OrderedLocusNames=BRADO5818 {ECO:0000313|EMBL:CAL79482.1};
OS Bradyrhizobium sp. (strain ORS 278).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=114615 {ECO:0000313|EMBL:CAL79482.1, ECO:0000313|Proteomes:UP000001994};
RN [1] {ECO:0000313|EMBL:CAL79482.1, ECO:0000313|Proteomes:UP000001994}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ORS 278 {ECO:0000313|Proteomes:UP000001994};
RX PubMed=17540897; DOI=10.1126/science.1139548;
RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C.,
RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L.,
RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z.,
RA Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E.,
RA Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G.,
RA Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
RT "Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
RL Science 316:1307-1312(2007).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CU234118; CAL79482.1; -; Genomic_DNA.
DR RefSeq; WP_012029385.1; NC_009445.1.
DR AlphaFoldDB; A4Z006; -.
DR STRING; 114615.BRADO5818; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; bra:BRADO5818; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_5; -.
DR OrthoDB; 3236218at2; -.
DR Proteomes; UP000001994; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000313|EMBL:CAL79482.1};
KW Hydrolase {ECO:0000313|EMBL:CAL79482.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001994}.
FT DOMAIN 160..571
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 468..491
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 691 AA; 78237 MW; 26472E1D21A9B8F3 CRC64;
MRLAAGSHAR LGATWDGRGT NFALFSANAE KVELCLFDSQ GRREIERIEL PERTEDVWHG
YLNDVSPGQL YGYRVYGPYE PERGHRFNAN KLLLDPYAKR LAGRLVWSDA HFAYRAGSPR
EDLSFDRRDN ARGMPKAVVI DETFNWGRRE MRPQIPWEDT IIYEAHVKGL TNRRDDVPPN
LRGTYGGLSS PAMIKHLKRM GVTTIELLPI HAFIDDRMLV EKKLVNYWGY NTISFFAPEQ
RYAQDNPLDA FRTTVARLHD AGIEVMLDVV YNHTAEGNHL GPTLCYRGID NASYYWLKPD
NPRFYDDFTG CGSSVNLTHP RVLQMVMDSL RYWVEVCHVD GFRFDLATTL AREKHGFDRR
SGFLTAIRQD PVLAGVKLVA EPWDVGLGGY QVGAFPSQWS EWNDRYRSAM RRYWSGEGSL
IGEVSSRMTG SSDIFNHDGR TQRASVNHVT VHDGFTLADL FAYNSKHNEA NGEDNRDGSN
DNHSNNFGHE GPTDDVVINA LRRQSRKNQL ACLFLAQGLP LLLAGDEVGN SQAGNNNAYC
QDNEVGWIDW SGMGREGDDL IDFIAHMTEL RRRFGQIRAR RWLDGRRSDG SFGVLWLTPS
AEEMTQTDWT FPDGRFLAYV LAPVEQEQAP IFIVLNAAPE EIGFKLPKLA ETKIWQQVLN
TTEAQQKPID FASGTDLKAP PRSVLAFAGL S
//
