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Database: UniProt
Entry: A5FJ44_FLAJ1
LinkDB: A5FJ44_FLAJ1
Original site: A5FJ44_FLAJ1 
ID   A5FJ44_FLAJ1            Unreviewed;       493 AA.
AC   A5FJ44;
DT   12-JUN-2007, integrated into UniProtKB/TrEMBL.
DT   12-JUN-2007, sequence version 1.
DT   24-JAN-2024, entry version 71.
DE   SubName: Full=Helix-turn-helix domain protein {ECO:0000313|EMBL:ABQ04769.1};
GN   OrderedLocusNames=Fjoh_1737 {ECO:0000313|EMBL:ABQ04769.1};
OS   Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC
OS   14942 / NCIMB 11054 / UW101) (Cytophaga johnsonae).
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Flavobacterium.
OX   NCBI_TaxID=376686 {ECO:0000313|EMBL:ABQ04769.1, ECO:0000313|Proteomes:UP000006694};
RN   [1] {ECO:0000313|EMBL:ABQ04769.1, ECO:0000313|Proteomes:UP000006694}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 /
RC   UW101 {ECO:0000313|Proteomes:UP000006694};
RX   PubMed=19717629; DOI=10.1128/AEM.01495-09;
RA   McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B., Rhodes R.G.,
RA   Goltsman E., Wang W., Xu J., Hunnicutt D.W., Staroscik A.M., Hoover T.R.,
RA   Cheng Y.Q., Stein J.L.;
RT   "Novel features of the polysaccharide-digesting gliding bacterium
RT   Flavobacterium johnsoniae as revealed by genome sequence analysis.";
RL   Appl. Environ. Microbiol. 75:6864-6875(2009).
CC   -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC       regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR   EMBL; CP000685; ABQ04769.1; -; Genomic_DNA.
DR   RefSeq; WP_012023813.1; NZ_MUGZ01000002.1.
DR   AlphaFoldDB; A5FJ44; -.
DR   STRING; 376686.Fjoh_1737; -.
DR   KEGG; fjo:Fjoh_1737; -.
DR   eggNOG; COG1396; Bacteria.
DR   eggNOG; COG3800; Bacteria.
DR   HOGENOM; CLU_533901_0_0_10; -.
DR   OMA; EHYCRRW; -.
DR   OrthoDB; 833147at2; -.
DR   Proteomes; UP000006694; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010359; IrrE_HExxH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR   Pfam; PF01381; HTH_3; 1.
DR   Pfam; PF06114; Peptidase_M78; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
FT   DOMAIN          16..70
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   493 AA;  56875 MW;  B55F22109AECB2CE CRC64;
     MDIEKDYIKL IFGLKLKQVR TQKNLSLFGL AKLTNLSKSY LNEIEKGKKY PKTDKILLLC
     EHLDVTYDQM VSLKLDNNLA PIGEILKSGI LKEIPLELFG IQEADLIDII ANAPAKVNAF
     ISTIIEIAQH YNLSRESFFL AALRSYQEAH SNYFEDLEEK VIAFSKSFQI NLDSKISVEE
     LEAILKEEYE YNIREIAFTD QEALGDLRSI YVPKSKTLLL STELDAPQKA FILAKEIAYN
     YLKISDRLLT FSWIKFENFD QVLHNFYASY FAGALLLPRK LVVDKINSFL ENENPKPEEF
     VQLIESFEVS PESFYQRLTN LLPKDFQLKN LFFLRLSHRI GSDVYQINKE LHITHQQEPH
     ANETNEHYCR RWVSVKTIDE AIKQNKSHFF DAQISSYANS GNEYLVFSSA TKDPFLHDTI
     RSISVGILIN PTMKKKFKVI DGKPLVKRIV GVTCETCAVQ DCLERAAPPV VLERKKRHEN
     TDAVVQQFMN QYS
//
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