ID A6D4X2_9VIBR Unreviewed; 601 AA.
AC A6D4X2;
DT 24-JUL-2007, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2007, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:EDL52320.1};
GN ORFNames=VSAK1_07124 {ECO:0000313|EMBL:EDL52320.1};
OS Vibrio mediterranei AK1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=391591 {ECO:0000313|EMBL:EDL52320.1, ECO:0000313|Proteomes:UP000003769};
RN [1] {ECO:0000313|EMBL:EDL52320.1, ECO:0000313|Proteomes:UP000003769}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AK1 {ECO:0000313|EMBL:EDL52320.1,
RC ECO:0000313|Proteomes:UP000003769};
RA Rosenberg E., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G.,
RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDL52320.1}.
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DR EMBL; ABCH01000034; EDL52320.1; -; Genomic_DNA.
DR AlphaFoldDB; A6D4X2; -.
DR Proteomes; UP000003769; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR025736; PucR_C-HTH_dom.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF13556; HTH_30; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 280..507
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 601 AA; 66919 MW; AD900A36FFE168B2 CRC64;
METGSSLART TEEHSGLIET TQQKVLPFYD SLLANSNCLI TLANTKGQVL NSWGEQRFFT
QHQPQVFQNG VQWKEQLIGT NAIGTALETG SIVQVFHDEH FLSSNRFMAG SAAPLFDADR
RMTGVLSISS DAYMPSSHTL GMVKLMSQAI ENQLIASRFQ ATHHLFWFNT SPENIDSQWS
SLLVFNDEGI IVSANRRAEV VLGQNLALQR LEQLFDVKME QVLSHPPFTP FPLTSRSQSN
YFGLTIPPTI PKGRQLDFRS VPQTTDIAAP TDRPLDLEQL NTGDPRLAKA INQASRILDT
DIPILIHGET GVGKEVFVNA LHQSSRRSHA PLIAVNCAAI PSELVESELF GYEKGAFTGA
HTKGYVGLIR KADKGTLFLD ELGDMPINVQ ARLLRVLQER KVTPLGSTTS YPVDFKLVSA
TNRNLKADVE RGTFRQDLYY RVTGLNITLP ALRERTDKEA LIRFILRKYA YGNEVPNLSV
EVLAMFKQHP WPGNIRQMVS VIQIAAAMAG DETITSEHLP DDFINDLKPY ESAPIQPILG
ATASDLSAAP NLVEQVTEQV SNNQEWLDIY EEYGRNISAT AKALNVSRNT LYKRLREQGL
R
//
