ID A6DFJ7_9BACT Unreviewed; 168 AA.
AC A6DFJ7;
DT 24-JUL-2007, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2007, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE SubName: Full=Probable ECF-like sigma factor SigE {ECO:0000313|EMBL:EDM29577.1};
GN ORFNames=LNTAR_17543 {ECO:0000313|EMBL:EDM29577.1};
OS Lentisphaera araneosa HTCC2155.
OC Bacteria; Lentisphaerota; Lentisphaeria; Lentisphaerales; Lentisphaeraceae;
OC Lentisphaera.
OX NCBI_TaxID=313628 {ECO:0000313|EMBL:EDM29577.1, ECO:0000313|Proteomes:UP000004947};
RN [1] {ECO:0000313|EMBL:EDM29577.1, ECO:0000313|Proteomes:UP000004947}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HTCC2155 {ECO:0000313|EMBL:EDM29577.1,
RC ECO:0000313|Proteomes:UP000004947};
RX PubMed=20363947; DOI=10.1128/JB.00208-10;
RA Thrash J.C., Cho J.C., Vergin K.L., Morris R.M., Giovannoni S.J.;
RT "Genome sequence of Lentisphaera araneosa HTCC2155T, the type species of
RT the order Lentisphaerales in the phylum Lentisphaerae.";
RL J. Bacteriol. 192:2938-2939(2010).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDM29577.1}.
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DR EMBL; ABCK01000001; EDM29577.1; -; Genomic_DNA.
DR RefSeq; WP_007276699.1; NZ_ABCK01000001.1.
DR AlphaFoldDB; A6DFJ7; -.
DR STRING; 313628.LNTAR_17543; -.
DR eggNOG; COG1595; Bacteria.
DR OrthoDB; 9780326at2; -.
DR Proteomes; UP000004947; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014331; RNA_pol_sigma70_ECF_RHOBA.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02989; Sig-70_gvs1; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF67; RNA POLYMERASE SIGMA FACTOR RFAY-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004947}.
FT DOMAIN 8..73
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 109..149
FT /note="Transposase IS30-like HTH"
FT /evidence="ECO:0000259|Pfam:PF13936"
SQ SEQUENCE 168 AA; 19665 MW; 9100A02DD5BCEEB1 CRC64;
MTFEQMLTEA QPRLYAYLLK RIRKPDVVKD LLQEVNIVIW MKKNNFIAGS NFNSWTYTIA
HYQLLKYLQK NKKSPLVFDN ELIQSFNDES YADKDFIMAR KEALDKCMKH LSDESRLIIN
VRYSKTKSVN EIAAEQNKSP NAISKVLHRS RLFLLKCISQ NIAEGKSI
//
