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Database: UniProt
Entry: A6H0I6_FLAPJ
LinkDB: A6H0I6_FLAPJ
Original site: A6H0I6_FLAPJ 
ID   A6H0I6_FLAPJ            Unreviewed;       596 AA.
AC   A6H0I6;
DT   24-JUL-2007, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2007, sequence version 1.
DT   05-JUN-2019, entry version 60.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   Name=rpsA {ECO:0000313|EMBL:CAL43859.1};
GN   OrderedLocusNames=FP1793 {ECO:0000313|EMBL:CAL43859.1};
OS   Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511).
OC   Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Flavobacterium.
OX   NCBI_TaxID=402612 {ECO:0000313|EMBL:CAL43859.1, ECO:0000313|Proteomes:UP000006394};
RN   [1] {ECO:0000313|EMBL:CAL43859.1, ECO:0000313|Proteomes:UP000006394}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JIP02/86 / ATCC 49511 {ECO:0000313|Proteomes:UP000006394};
RX   PubMed=17592475; DOI=10.1038/nbt1313;
RA   Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C.,
RA   Kerouault B., Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P.,
RA   Gibrat J.-F., Claverol S., Dumetz F., Le Henaff M., Benmansour A.;
RT   "Complete genome sequence of the fish pathogen Flavobacterium
RT   psychrophilum.";
RL   Nat. Biotechnol. 25:763-769(2007).
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the
CC       initiation point. It is needed to translate mRNA with a short
CC       Shine-Dalgarno (SD) purine-rich sequence.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
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DR   EMBL; AM398681; CAL43859.1; -; Genomic_DNA.
DR   RefSeq; WP_011963900.1; NC_009613.3.
DR   RefSeq; YP_001296664.1; NC_009613.3.
DR   STRING; 402612.FP1793; -.
DR   EnsemblBacteria; CAL43859; CAL43859; FP1793.
DR   GeneID; 5299547; -.
DR   KEGG; fps:FP1793; -.
DR   PATRIC; fig|402612.5.peg.1814; -.
DR   eggNOG; ENOG4105CAV; Bacteria.
DR   eggNOG; COG0539; LUCA.
DR   HOGENOM; HOG000044052; -.
DR   KO; K02945; -.
DR   OMA; SLNEFRY; -.
DR   BioCyc; FPSY402612:G1GJP-1519-MONOMER; -.
DR   Proteomes; UP000006394; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 3.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006394};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006394};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:CAL43859.1};
KW   RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN       49    112       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      130    196       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      217    285       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      302    372       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      389    459       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      476    541       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   REGION      548    596       Disordered. {ECO:0000256|MobiDB-lite:
FT                                A6H0I6}.
FT   COMPBIAS    555    579       Polar. {ECO:0000256|MobiDB-lite:A6H0I6}.
SQ   SEQUENCE   596 AA;  66399 MW;  33358764787D2E32 CRC64;
     MSETLKSQEQ FLADFNWHNY SEGIDPVDAA NLREFEELVA KTFIATDQEE VVEGVVVRIT
     DRDVIVDINA KSEGVISLNE FRYNPSLKVG DKVEVLIDIR EDKTGQLVLS HRKARTIKAW
     DRVISANETG EIVNGFVKCR TKGGMIVDVF GIEAFLPGSQ IDVKPIRDYD QYVNKMMEFK
     VVKINHEFKN VVVSHKALIE ADIEVQKKEI IGQLQKGQVL EGVVKNITSY GVFIDLGGVD
     GLIHITDLSW SRINHPSEVL ELDQKLNVVI LDFDDEKTRI QLGLKQLNAH PWDALDANLA
     IGDKVKGKVV VIADYGAFIE VAEGVEGLIH VSEMSWSTHL RSAQDFVKVG DIVEGVILTL
     DRSERKMSLG IKQMTQDPWT DITSKYPVGS KHTGTVRNFT NFGIFVELEE GIDGLVYISD
     LSWTKKIKHP SEFIAVGEKL DIVVLELDVD ARKLSLGHKQ TTANPWDKHE AAFAVGTIHN
     GEIAEIVEKG ATVDFGDDVV AFIPTRHLEK EDGKKLKKGD TADFKVIEFN KEFKRVVASH
     TAIFREEEEK NVKTASDNNS NSNTSSSNNN ASASTLGDNN DVLAALKAKM EQSEKK
//
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