ID A6LVL2_CLOB8 Unreviewed; 295 AA.
AC A6LVL2;
DT 24-JUL-2007, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2007, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=Transcriptional regulator, TrmB {ECO:0000313|EMBL:ABR34392.1};
GN OrderedLocusNames=Cbei_2227 {ECO:0000313|EMBL:ABR34392.1};
OS Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium
OS acetobutylicum).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=290402 {ECO:0000313|EMBL:ABR34392.1, ECO:0000313|Proteomes:UP000000565};
RN [1] {ECO:0000313|EMBL:ABR34392.1, ECO:0000313|Proteomes:UP000000565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G.,
RA Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W.,
RA Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B.,
RA Blaschek H., Richardson P.;
RT "Complete sequence of Clostridium beijerinckii NCIMB 8052.";
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABR34392.1, ECO:0000313|Proteomes:UP000000565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RX PubMed=21962126; DOI=10.1186/1471-2164-12-479;
RA Wang Y., Li X., Mao Y., Blaschek H.P.;
RT "Single-nucleotide resolution analysis of the transcriptome structure of
RT Clostridium beijerinckii NCIMB 8052 using RNA-Seq.";
RL BMC Genomics 12:479-479(2011).
RN [3] {ECO:0000313|EMBL:ABR34392.1, ECO:0000313|Proteomes:UP000000565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51743 / NCIMB 8052 {ECO:0000313|Proteomes:UP000000565};
RX PubMed=22433311; DOI=10.1186/1471-2164-13-102;
RA Wang Y., Li X., Mao Y., Blaschek H.P.;
RT "Genome-wide dynamic transcriptional profiling in clostridium beijerinckii
RT NCIMB 8052 using single-nucleotide resolution RNA-Seq.";
RL BMC Genomics 13:102-102(2012).
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DR EMBL; CP000721; ABR34392.1; -; Genomic_DNA.
DR AlphaFoldDB; A6LVL2; -.
DR KEGG; cbe:Cbei_2227; -.
DR eggNOG; COG1378; Bacteria.
DR HOGENOM; CLU_072493_1_0_9; -.
DR Proteomes; UP000000565; Chromosome.
DR CDD; cd09124; PLDc_like_TrmB_middle; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR021586; Tscrpt_reg_TrmB_C.
DR InterPro; IPR002831; Tscrpt_reg_TrmB_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR34293; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRMBL2; 1.
DR PANTHER; PTHR34293:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRMBL2; 1.
DR Pfam; PF11495; Regulator_TrmB; 1.
DR Pfam; PF01978; TrmB; 1.
DR SUPFAM; SSF56024; Phospholipase D/nuclease; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 30..96
FT /note="Transcription regulator TrmB N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01978"
FT DOMAIN 131..224
FT /note="Transcription regulator TrmB C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11495"
FT COILED 150..177
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 295 AA; 33648 MW; A4F06231B6A15BBC CRC64;
MSIDLVIILV TKVATNIIGG FMEDNILEVL KNLNFTEYEA KAYLTLLEES PLTGYAVAKN
SGVPRSKIYE VLDSLAMRGD ILISHGNTQQ YVPIPAKELI KNRRIKAEEN FKLAETSLEQ
YNQSSKNREN IWNITGHDEI LDKVKECILS AKHRILLELW KEEFKELEAE LKKVADKGVV
VTIIAYGEII ADFANVYPHD MSTEITDEYG GRWIVASADN SEVVAGIVSL GKDSRAAWTM
HQGLVMPITE VMIHDLYIME IMEKHRELLE ESFGKNLIEL RKKFSIYQDL KKHYV
//
