ID A6Q2Z3_NITSB Unreviewed; 492 AA.
AC A6Q2Z3;
DT 21-AUG-2007, integrated into UniProtKB/TrEMBL.
DT 21-AUG-2007, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAF69852.1};
GN OrderedLocusNames=NIS_0738 {ECO:0000313|EMBL:BAF69852.1};
OS Nitratiruptor sp. (strain SB155-2).
OC Bacteria; Campylobacterota; Epsilonproteobacteria; Nautiliales;
OC Nitratiruptoraceae; Nitratiruptor.
OX NCBI_TaxID=387092 {ECO:0000313|EMBL:BAF69852.1, ECO:0000313|Proteomes:UP000001118};
RN [1] {ECO:0000313|EMBL:BAF69852.1, ECO:0000313|Proteomes:UP000001118}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SB155-2 {ECO:0000313|EMBL:BAF69852.1,
RC ECO:0000313|Proteomes:UP000001118};
RX PubMed=17615243; DOI=10.1073/pnas.0700687104;
RA Nakagawa S., Takaki Y., Shimamura S., Reysenbach A.-L., Takai K.,
RA Horikoshi K.;
RT "Deep-sea vent epsilon-proteobacterial genomes provide insights into
RT emergence of pathogens.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:12146-12150(2007).
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP009178; BAF69852.1; -; Genomic_DNA.
DR RefSeq; WP_012082115.1; NC_009662.1.
DR AlphaFoldDB; A6Q2Z3; -.
DR STRING; 387092.NIS_0738; -.
DR KEGG; nis:NIS_0738; -.
DR eggNOG; COG2989; Bacteria.
DR HOGENOM; CLU_020360_3_4_7; -.
DR InParanoid; A6Q2Z3; -.
DR OrthoDB; 9778545at2; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000001118; Chromosome.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR002477; Peptidoglycan-bd-like.
DR InterPro; IPR036365; PGBD-like_sf.
DR InterPro; IPR036366; PGBDSf.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR PANTHER; PTHR41533:SF1; L,D-TRANSPEPTIDASE YCBB-RELATED; 1.
DR Pfam; PF01471; PG_binding_1; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF47090; PGBD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001118};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 177..233
FT /note="Peptidoglycan binding-like"
FT /evidence="ECO:0000259|Pfam:PF01471"
FT DOMAIN 260..428
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 492 AA; 58677 MW; BB77AF25A3516136 CRC64;
MRILFLFLIP LMLLSNSDEF NQTKTPDPNP LFQSVWFYEN GAEKEELYTL IGQIKKDNTL
LCKNRLTKPL LKLERLLREY RVDANDDLKN DIEKLAYALQ LQYFNIRNNG CYRPEMILQD
HYLPPTKKSY DHILQNPYLD MLYEILNKYE NIKKRGGWGV ITLSNDYAYL LPGKKYDEVV
QLRWRLMQEG YLKDQNMTDT VYDENLKLAV EEFQRRHFLK PDGIVGPTTL KVLNESVESI
IEKILINIER LRWYLQEDKS YVFVNIPQFR LFLWHDGDMV FDSKVIVGRK ERPTPLMRHE
ISYAVLNPYW RAPKTIIAQD ILPKLKAGKF EELEKEGIIA SLDRYANETI PFDLIYWDAI
DLSTFPIVFL QKPGPKNFLG FVKLMFPNKY DVYLHDTNAR DLFRYSYRAL SSGCVRVEKP
IELFHLVEGT LSYREIFDRL WDHQTKKVRI HPKFPVYLMY ITVMKEDDGN IYFYPDIYQL
DRKIKDYVTI LH
//
