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Database: UniProt
Entry: A7F4D5_SCLS1
LinkDB: A7F4D5_SCLS1
Original site: A7F4D5_SCLS1 
ID   A7F4D5_SCLS1            Unreviewed;       495 AA.
AC   A7F4D5;
DT   11-SEP-2007, integrated into UniProtKB/TrEMBL.
DT   11-SEP-2007, sequence version 1.
DT   24-JAN-2024, entry version 73.
DE   RecName: Full=poly(A)-specific ribonuclease {ECO:0000256|ARBA:ARBA00012161};
DE            EC=3.1.13.4 {ECO:0000256|ARBA:ARBA00012161};
GN   ORFNames=SS1G_12459 {ECO:0000313|EMBL:EDN97606.1};
OS   Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold)
OS   (Whetzelinia sclerotiorum).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC   Helotiales; Sclerotiniaceae; Sclerotinia.
OX   NCBI_TaxID=665079 {ECO:0000313|EMBL:EDN97606.1, ECO:0000313|Proteomes:UP000001312};
RN   [1] {ECO:0000313|Proteomes:UP000001312}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 18683 / 1980 / Ss-1 {ECO:0000313|Proteomes:UP000001312};
RX   PubMed=21876677; DOI=.1371/journal.pgen.1002230;
RA   Amselem J., Cuomo C.A., van Kan J.A., Viaud M., Benito E.P., Couloux A.,
RA   Coutinho P.M., de Vries R.P., Dyer P.S., Fillinger S., Fournier E.,
RA   Gout L., Hahn M., Kohn L., Lapalu N., Plummer K.M., Pradier J.M.,
RA   Quevillon E., Sharon A., Simon A., ten Have A., Tudzynski B., Tudzynski P.,
RA   Wincker P., Andrew M., Anthouard V., Beever R.E., Beffa R., Benoit I.,
RA   Bouzid O., Brault B., Chen Z., Choquer M., Collemare J., Cotton P.,
RA   Danchin E.G., Da Silva C., Gautier A., Giraud C., Giraud T., Gonzalez C.,
RA   Grossetete S., Guldener U., Henrissat B., Howlett B.J., Kodira C.,
RA   Kretschmer M., Lappartient A., Leroch M., Levis C., Mauceli E.,
RA   Neuveglise C., Oeser B., Pearson M., Poulain J., Poussereau N.,
RA   Quesneville H., Rascle C., Schumacher J., Segurens B., Sexton A., Silva E.,
RA   Sirven C., Soanes D.M., Talbot N.J., Templeton M., Yandava C., Yarden O.,
RA   Zeng Q., Rollins J.A., Lebrun M.H., Dickman M.;
RT   "Genomic analysis of the necrotrophic fungal pathogens Sclerotinia
RT   sclerotiorum and Botrytis cinerea.";
RL   PLoS Genet. 7:E1002230-E1002230(2011).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Exonucleolytic cleavage of poly(A) to 5'-AMP.; EC=3.1.13.4;
CC         Evidence={ECO:0000256|ARBA:ARBA00001663};
CC   -!- SIMILARITY: Belongs to the CAF1 family.
CC       {ECO:0000256|ARBA:ARBA00008372}.
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DR   EMBL; CH476641; EDN97606.1; -; Genomic_DNA.
DR   RefSeq; XP_001586473.1; XM_001586423.1.
DR   AlphaFoldDB; A7F4D5; -.
DR   STRING; 665079.A7F4D5; -.
DR   EnsemblFungi; EDN97606; EDN97606; SS1G_12459.
DR   GeneID; 5482487; -.
DR   KEGG; ssl:SS1G_12459; -.
DR   VEuPathDB; FungiDB:sscle_06g054570; -.
DR   eggNOG; KOG0304; Eukaryota.
DR   HOGENOM; CLU_027974_3_0_1; -.
DR   InParanoid; A7F4D5; -.
DR   OMA; QMRDRIF; -.
DR   OrthoDB; 341493at2759; -.
DR   Proteomes; UP000001312; Unassembled WGS sequence.
DR   GO; GO:0030015; C:CCR4-NOT core complex; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000932; C:P-body; IBA:GO_Central.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004535; F:poly(A)-specific ribonuclease activity; IBA:GO_Central.
DR   GO; GO:0043928; P:exonucleolytic catabolism of deadenylated mRNA; IBA:GO_Central.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR039637; CNOT7/CNOT8/Pop2.
DR   InterPro; IPR006941; RNase_CAF1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR10797; CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT; 1.
DR   PANTHER; PTHR10797:SF0; CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 7; 1.
DR   Pfam; PF04857; CAF1; 2.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001312};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   REGION          1..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          429..495
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        13..27
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   495 AA;  53825 MW;  0FAF00307AC71DFB CRC64;
     MPPRMQGYGG APNSMASHYQ QYPPHTQPHT AGLPPPGSIG NQFMSANSMS NAFANGANMG
     IPGGFSAPGL PLQGGGLASQ AAQMSFAAAP LQQQGHNGMA DSGTRGMRDK GRIRDVWKGN
     LHEEMAILRQ LVDKYPYISM DAKFPGIVAR PMGSFNGRGD YHYQCLRCNV DLLKLIQLGI
     TLFSEDGESL PATPHSDSGL DRNSAGRRIG NGVVQVPCTW QFNFKFSLSD DMYAEKGIDE
     RKAAGTDFSR LKEEGIDPFE FGAVLISSGL VCDEEKRWIS GHAGYDFGYL TKIMLQRALP
     DDEREFDMLM KKFFPSVYDI KYLMQQGTIM SKLGQLSHVD AVTAELLQRN ERHPNLEAMI
     DVLKVKRLGA IHQAGSDSLV NGRVFFKLRE RLFDGEIGDE HLGRVFGINL QEANTAATTQ
     QTTPQHYNQY QENTTPNQNG SGSSFANGAP STPNNGNANL ATTPAHNNNG GNGLGPLTPS
     NGGGSFGHFQ YANKQ
//
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