ID A8MB80_CALMQ Unreviewed; 661 AA.
AC A8MB80;
DT 04-DEC-2007, integrated into UniProtKB/TrEMBL.
DT 04-DEC-2007, sequence version 1.
DT 24-JAN-2024, entry version 73.
DE SubName: Full=Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1};
GN OrderedLocusNames=Cmaq_0322 {ECO:0000313|EMBL:ABW01170.1};
OS Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 /
OS IC-167).
OC Archaea; Thermoproteota; Thermoprotei; Thermoproteales; Thermoproteaceae;
OC Caldivirga.
OX NCBI_TaxID=397948 {ECO:0000313|EMBL:ABW01170.1, ECO:0000313|Proteomes:UP000001137};
RN [1] {ECO:0000313|EMBL:ABW01170.1, ECO:0000313|Proteomes:UP000001137}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700844 / DSM 13496 / JCM 10307 / IC-167
RC {ECO:0000313|Proteomes:UP000001137};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C.,
RA Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Ivanova N., Biddle J.F., Zhang Z., Fitz-Gibbon S.T., Lowe T.M.,
RA Saltikov C., House C.H., Richardson P.;
RT "Complete sequence of Caldivirga maquilingensis IC-167.";
RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS12 family.
CC {ECO:0000256|ARBA:ARBA00005657}.
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DR EMBL; CP000852; ABW01170.1; -; Genomic_DNA.
DR RefSeq; WP_012185390.1; NC_009954.1.
DR AlphaFoldDB; A8MB80; -.
DR STRING; 397948.Cmaq_0322; -.
DR GeneID; 42991005; -.
DR KEGG; cma:Cmaq_0322; -.
DR eggNOG; arCOG03158; Archaea.
DR eggNOG; arCOG04255; Archaea.
DR HOGENOM; CLU_414829_0_0_2; -.
DR OrthoDB; 45154at2157; -.
DR Proteomes; UP000001137; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00081; Hint; 1.
DR Gene3D; 2.170.16.10; Hedgehog/Intein (Hint) domain; 2.
DR Gene3D; 3.10.28.10; Homing endonucleases; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR003586; Hint_dom_C.
DR InterPro; IPR003587; Hint_dom_N.
DR InterPro; IPR036844; Hint_dom_sf.
DR InterPro; IPR027434; Homing_endonucl.
DR InterPro; IPR006142; INTEIN.
DR InterPro; IPR030934; Intein_C.
DR InterPro; IPR004042; Intein_endonuc.
DR InterPro; IPR006141; Intein_N.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006032; Ribosomal_uS12.
DR NCBIfam; TIGR01443; intein_Cterm; 1.
DR PANTHER; PTHR11652; 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER; 1.
DR PANTHER; PTHR11652:SF14; 40S RIBOSOMAL PROTEIN S23; 1.
DR Pfam; PF14890; Intein_splicing; 1.
DR Pfam; PF00164; Ribosom_S12_S23; 2.
DR PRINTS; PR00379; INTEIN.
DR SMART; SM00305; HintC; 1.
DR SMART; SM00306; HintN; 1.
DR SUPFAM; SSF51294; Hedgehog/intein (Hint) domain; 1.
DR SUPFAM; SSF55608; Homing endonucleases; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50818; INTEIN_C_TER; 1.
DR PROSITE; PS50819; INTEIN_ENDONUCLEASE; 1.
DR PROSITE; PS50817; INTEIN_N_TER; 1.
PE 3: Inferred from homology;
KW Autocatalytic cleavage {ECO:0000256|ARBA:ARBA00022813};
KW Protein splicing {ECO:0000256|ARBA:ARBA00023000};
KW Reference proteome {ECO:0000313|Proteomes:UP000001137};
KW Ribonucleoprotein {ECO:0000313|EMBL:ABW01170.1};
KW Ribosomal protein {ECO:0000313|EMBL:ABW01170.1}.
FT DOMAIN 232..404
FT /note="DOD-type homing endonuclease"
FT /evidence="ECO:0000259|PROSITE:PS50819"
FT DOMAIN 563..586
FT /note="Intein C-terminal splicing"
FT /evidence="ECO:0000259|PROSITE:PS50818"
SQ SEQUENCE 661 AA; 74356 MW; C8BCF6F29740787F CRC64;
MSGKKSPLGL YAARKLRRKR QKFRWSDIQY KKRALGFIKK YDPLEGAPMA RGIVLEKVGV
EARKPNAAVR KCVTPDTLIN LTPRVATRII NLAGNWHEVS IIHFNKGSKV IEPTRLIDFF
HIEPEEFRED GVYELRTLYG RRIIASGDHP IYTGRGILPL KEVKPGDYVA VYPREPIEAY
TLNDDRVILT EDDIRREAPP NAKVDQIINR LKELGLIPLK YSNSNIYRIA RLVGHLFGDG
SLSYVKSGNG YEGKVAFSGN PSDLEDIIND LIELGFKPSK IREYHGESIV TWSNGLMNVI
SGKSNVAFVT SITLFTLLKA LGIPVGDKAL QAYRVPEWVM EAPLDVKAEF LAAYFGSELE
RPRVENNGRT FQPPTLVIHK AENLAGNGIE FLNDIRKLLS EFGIETTPVS VSSGVIRKNG
IRTVRLRFSI ISNTNNLLRF FGRIGYAYNK EHDSLAVLAY EYLRRKVLLW QHYADAYELT
RKLMSEGYDG PSIVKALRSA GYRVSRATVY KWLKGVKNTK YIGRTARIPS FSDWIIKATL
GLGNSGLVWD VVTEVKPIEW NDRLWDVTTE SSYHNFIANG LVTGNCVRVQ LTKNGKVVTA
FVPWDGGLNL INEHDEVIIE RIGGPEGRAY GDLPGVRFKV TKVNGVSLKA ILLGKKQKPV
R
//
