ID A8NCH8_COPC7 Unreviewed; 847 AA.
AC A8NCH8;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 2.
DT 24-JAN-2024, entry version 61.
DE RecName: Full=HMG box domain-containing protein {ECO:0000259|PROSITE:PS50118};
GN ORFNames=CC1G_03536 {ECO:0000313|EMBL:EAU89271.2};
OS Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
OS (Inky cap fungus) (Hormographiella aspergillata).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Psathyrellaceae; Coprinopsis.
OX NCBI_TaxID=240176 {ECO:0000313|EMBL:EAU89271.2, ECO:0000313|Proteomes:UP000001861};
RN [1] {ECO:0000313|EMBL:EAU89271.2, ECO:0000313|Proteomes:UP000001861}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003
RC {ECO:0000313|Proteomes:UP000001861};
RX PubMed=20547848; DOI=10.1073/pnas.1003391107;
RA Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., Borodovsky M.,
RA Burns C., Canback B., Casselton L.A., Cheng C.K., Deng J., Dietrich F.S.,
RA Fargo D.C., Farman M.L., Gathman A.C., Goldberg J., Guigo R., Hoegger P.J.,
RA Hooker J.B., Huggins A., James T.Y., Kamada T., Kilaru S., Kodira C.,
RA Kues U., Kupfer D., Kwan H.S., Lomsadze A., Li W., Lilly W.W., Ma L.J.,
RA Mackey A.J., Manning G., Martin F., Muraguchi H., Natvig D.O.,
RA Palmerini H., Ramesh M.A., Rehmeyer C.J., Roe B.A., Shenoy N., Stanke M.,
RA Ter-Hovhannisyan V., Tunlid A., Velagapudi R., Vision T.J., Zeng Q.,
RA Zolan M.E., Pukkila P.J.;
RT "Insights into evolution of multicellular fungi from the assembled
RT chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).";
RL Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAU89271.2}.
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DR EMBL; AACS02000009; EAU89271.2; -; Genomic_DNA.
DR RefSeq; XP_001832522.2; XM_001832470.2.
DR AlphaFoldDB; A8NCH8; -.
DR GeneID; 6009009; -.
DR KEGG; cci:CC1G_03536; -.
DR VEuPathDB; FungiDB:CC1G_03536; -.
DR eggNOG; ENOG502S423; Eukaryota.
DR HOGENOM; CLU_336493_0_0_1; -.
DR InParanoid; A8NCH8; -.
DR OrthoDB; 1614477at2759; -.
DR Proteomes; UP000001861; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd01389; HMG-box_ROX1-like; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 2.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR10270:SF161; SOX DOMAIN-CONTAINING PROTEIN DICHAETE-RELATED; 1.
DR PANTHER; PTHR10270; SOX TRANSCRIPTION FACTOR; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000001861};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 704..728
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 100..172
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 100..172
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 63..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 171..200
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..282
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 672..697
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 794..847
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..94
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..241
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 267..282
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 794..829
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 847 AA; 91455 MW; 25492190EE340301 CRC64;
MPVYRSNTRV RHYDHPYYLT PPCNHNSMVP DRAAAYDTYG SLQPALDSVV AFVSKLGLIL
PDSNALRCNE PSPNTTPTSP QSPVYQPPSP KKKEPTTTRP PRPKNVFIIF RSEFCKTRRD
ATHADGKKVN QNELSVQAGQ IWNMMSAEER KPFQRLHEEE VRRHNLMYPE HQYVPNSRKS
KGPGVKPKVG KKRAGEKGAG GTVLLDDFDF LRPQSAGSVP APSPASSSSS YYASSESESA
GAPEKVNDVQ AKQVAMEAPR PSSLETGLEP QLGSLGIDNN NDHDSSPAIL PFNTAVAPYT
PTSALNSARA SFASRLGGIP VPQAEFTPGP ASSSLGDLPY NYDELPSAGL NLGPPRYPLD
EEQLFEAKCN SESAAKLYCL HLDMAEPPIS NWVIVDDDNP ILQYDGEWET NPEGVAAINR
PNWAGPLYNY TARWTTTSGS VSITFDGTWA RLQGTTNLTR NSASCSTCPT WTCAVDGQSV
PLVEPSFGLL SNRVLCDSGP LQPGSHTLTV DVTGRGDPFW VDFFRYIPSA QASISPPPTL
FVDALVPGVQ YDSSWTMLAN GWPNRMTHAP GAQLNFTFVG TSIAWYGIIP WRSPSVYARA
EYSIDGGPPI PFFINDFPES PGDRLTNQLF FKSRSLPDGR HDLNVVYRGD PSSAPLSLDY
FIVERGGWLN DSAIEDPGPG GGEGASGGGG QEPPVEHGLS KAQLGGIIGG ASVAAVLILL
LLAYIIYLRR SRKPSDGRYS TLHQPSSAPP VSEMAIHPFH PRVAANTFNE PTLPSSTFNR
SIFGGAPVFK TRATSPGISS PLSPAEGHSG SSSGWSTSGM STDPEGRTAV QRAQDNPEDR
PPVYTPS
//
