ID A8X4T8_CAEBR Unreviewed; 339 AA.
AC A8X4T8;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=Protein CBG07415 {ECO:0000313|EMBL:CAP27648.1};
GN Name=col-9 {ECO:0000313|WormBase:CBG07415};
GN ORFNames=CBG07415 {ECO:0000313|EMBL:CAP27648.1,
GN ECO:0000313|WormBase:CBG07415}, CBG_07415
GN {ECO:0000313|EMBL:CAP27648.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP27648.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP27648.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP27648.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
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DR EMBL; HE601041; CAP27648.1; -; Genomic_DNA.
DR RefSeq; XP_002645742.1; XM_002645696.1.
DR AlphaFoldDB; A8X4T8; -.
DR EnsemblMetazoa; CBG07415.1; CBG07415.1; WBGene00029472.
DR GeneID; 8587741; -.
DR KEGG; cbr:CBG_07415; -.
DR CTD; 8587741; -.
DR WormBase; CBG07415; CBP07621; WBGene00029472; Cbr-col-9.
DR eggNOG; KOG3544; Eukaryota.
DR HOGENOM; CLU_001074_4_2_1; -.
DR InParanoid; A8X4T8; -.
DR OMA; PHNRTVR; -.
DR OrthoDB; 5679936at2759; -.
DR Proteomes; UP000008549; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR PANTHER; PTHR24637:SF289; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008549};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..41
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 14..66
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 149..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..236
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 283..303
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 339 AA; 33184 MW; 2697C2A5176E7D20 CRC64;
MESHIDLKLQ TLRFVAYSAV GYSVIAAVSV CITVPLLYSY AQNAKILITK ETVYCKTSMH
DIWLDITETA EEPHNRTVRG AYAVAQQGGS GGGYRTAMTN SGGYWTPTRN SGNPGGYATL
RPNVNVFSNA PRPVNKGCTG CCNPGPPGPP GRPGKNGNHG KPGAPGQPGS SGASASPPCE
STTPPPCQPC PAGPPGPIGP GGPPGPPGQM GPPAPPSAPL PGLPGPAGPP GIPGQQGAPG
SPGGPGEPAS SMPSGSAAPG PMGPPGPMGP PGSDGQSSGG SGPPGPKGPP GPAGQPGSDG
NPGPPGQPGS SGGLGEKGIC PKYCAIDGGI FFEDGTRRR
//
