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Database: UniProt
Entry: A8XV41_CAEBR
LinkDB: A8XV41_CAEBR
Original site: A8XV41_CAEBR 
ID   A8XV41_CAEBR            Unreviewed;       951 AA.
AC   A8XV41;
DT   15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT   15-JAN-2008, sequence version 1.
DT   24-JAN-2024, entry version 86.
DE   SubName: Full=Protein CBR-PTR-1 {ECO:0000313|EMBL:CAP36508.1};
GN   Name=ptr-1 {ECO:0000313|WormBase:CBG19221};
GN   Synonyms=Cbr-ptr-1 {ECO:0000313|EMBL:CAP36508.1};
GN   ORFNames=CBG19221 {ECO:0000313|WormBase:CBG19221}, CBG_19221
GN   {ECO:0000313|EMBL:CAP36508.1};
OS   Caenorhabditis briggsae.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC   Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC   Caenorhabditis.
OX   NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP36508.1, ECO:0000313|Proteomes:UP000008549};
RN   [1] {ECO:0000313|EMBL:CAP36508.1, ECO:0000313|Proteomes:UP000008549}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AF16 {ECO:0000313|EMBL:CAP36508.1,
RC   ECO:0000313|Proteomes:UP000008549};
RX   PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA   Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA   Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA   Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA   Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA   Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA   Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA   Durbin R., Waterston R.H.;
RT   "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT   genomics.";
RL   PLoS Biol. 1:166-192(2003).
CC   -!- SIMILARITY: Belongs to the patched family.
CC       {ECO:0000256|ARBA:ARBA00005585}.
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DR   EMBL; HE601047; CAP36508.1; -; Genomic_DNA.
DR   RefSeq; XP_002637500.1; XM_002637454.1.
DR   AlphaFoldDB; A8XV41; -.
DR   STRING; 6238.A8XV41; -.
DR   EnsemblMetazoa; CBG19221.1; CBG19221.1; WBGene00038479.
DR   GeneID; 8579495; -.
DR   KEGG; cbr:CBG_19221; -.
DR   CTD; 8579495; -.
DR   WormBase; CBG19221; CBP11101; WBGene00038479; Cbr-ptr-1.
DR   eggNOG; KOG1934; Eukaryota.
DR   HOGENOM; CLU_002359_2_1_1; -.
DR   InParanoid; A8XV41; -.
DR   OMA; ITVIMCI; -.
DR   OrthoDB; 2876883at2759; -.
DR   Proteomes; UP000008549; Chromosome V.
DR   GO; GO:0030659; C:cytoplasmic vesicle membrane; IBA:GO_Central.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0006897; P:endocytosis; IBA:GO_Central.
DR   GO; GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IBA:GO_Central.
DR   GO; GO:0090597; P:nematode male tail mating organ morphogenesis; IEA:EnsemblMetazoa.
DR   Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR   InterPro; IPR003392; Ptc/Disp.
DR   InterPro; IPR000731; SSD.
DR   PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR   PANTHER; PTHR10796:SF191; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF02460; Patched; 1.
DR   SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR   PROSITE; PS50156; SSD; 1.
PE   3: Inferred from homology;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008549};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        24..44
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        290..308
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        329..353
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        359..379
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        400..422
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        428..455
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        801..822
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        828..851
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        863..887
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        893..921
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          288..453
FT                   /note="SSD"
FT                   /evidence="ECO:0000259|PROSITE:PS50156"
FT   REGION          494..513
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          932..951
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   951 AA;  108849 MW;  46D9454B91000ED4 CRC64;
     MGWFDDKIHE VFYNVGVRVH KFRLYFLLLS FAILTFASFG FLWFEKQTTR DPQYVFSPAN
     APWRYERAVL TEHWPLDEEK FWPGKSYDLH GYVDVIASGR VHPDYGRPNI LNIRYLDEVA
     RINDYIVHNL TVPVDINGKH YDIAYTDLCM RYDWACFLND HITMLMPKTR WGNFSGPFAE
     FASDIINTQV NITYPIGWRG TEPIYFGALV GAPNLVDEEG HFDFATAIRL TYNTREGKVD
     EYGIEWRRKL AKWLTDKENP VSELLEFGVN HNMTLPEGLQ DVADTLAPKF VGTCAILFTF
     SFLVSVVLRR HSAGQVMIDW VRSKPLVAAA GLMTPVMATV TSFGLILWCG QLYNAIVNVS
     PFLILCIGID DLFIMSAEWH RTNPKDSAEK RIGHTLSEAA VAISITSITD ITTFAVGCYT
     TLPGVQMFCM YTCVQCFFCY VYQIIFLGPV LAYAAEMEQN DQHALLFRKA VDPEKTESKL
     KLWLLSGSVN RQNQDVHKRK SKKVAPVEEE NEKKSKLGEM VAKLEHTLEK HDEDPGHNSE
     ETLVSKIFRE IIGPFILQRS TQVCALLLYL VYISLAIGGC WNIKEGLDPK LLVRESFYLS
     KFYEIIDETF WREGLQMQVV VNNPPDLFDP ESRKGFDEMM ADFEGTQYTM NPNATMIWLR
     AYENHLETEV HELNIQKPKT SSEWYKRCRD WLIVAGGRRL WQMDLVWANT SFEETPRITA
     FRFQLGLRNY RTPTDHTHSC KMMRAIAEKH SKFNVTTFHE YYPFADQYLE LTPSLFQNMF
     MDLGTILLVS MIMIPEWRCA IAIVLSIASI NVGVLGFMSY WGVNLDSVSI ITVIMCIGFA
     VDLSAHIAYA FSQSYGNSHT RAVAALETLG WPVFLGASST VLGILLLTLV DSYIVQIFFK
     TVFLVINFSI LHGLIFLPIL LMKIVRGVRT RDGESNEKPK TQMEMESQTA A
//
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