ID A8XV41_CAEBR Unreviewed; 951 AA.
AC A8XV41;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 24-JAN-2024, entry version 86.
DE SubName: Full=Protein CBR-PTR-1 {ECO:0000313|EMBL:CAP36508.1};
GN Name=ptr-1 {ECO:0000313|WormBase:CBG19221};
GN Synonyms=Cbr-ptr-1 {ECO:0000313|EMBL:CAP36508.1};
GN ORFNames=CBG19221 {ECO:0000313|WormBase:CBG19221}, CBG_19221
GN {ECO:0000313|EMBL:CAP36508.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP36508.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP36508.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP36508.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
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DR EMBL; HE601047; CAP36508.1; -; Genomic_DNA.
DR RefSeq; XP_002637500.1; XM_002637454.1.
DR AlphaFoldDB; A8XV41; -.
DR STRING; 6238.A8XV41; -.
DR EnsemblMetazoa; CBG19221.1; CBG19221.1; WBGene00038479.
DR GeneID; 8579495; -.
DR KEGG; cbr:CBG_19221; -.
DR CTD; 8579495; -.
DR WormBase; CBG19221; CBP11101; WBGene00038479; Cbr-ptr-1.
DR eggNOG; KOG1934; Eukaryota.
DR HOGENOM; CLU_002359_2_1_1; -.
DR InParanoid; A8XV41; -.
DR OMA; ITVIMCI; -.
DR OrthoDB; 2876883at2759; -.
DR Proteomes; UP000008549; Chromosome V.
DR GO; GO:0030659; C:cytoplasmic vesicle membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0006897; P:endocytosis; IBA:GO_Central.
DR GO; GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IBA:GO_Central.
DR GO; GO:0090597; P:nematode male tail mating organ morphogenesis; IEA:EnsemblMetazoa.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR PANTHER; PTHR10796:SF191; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02460; Patched; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008549};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 24..44
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 290..308
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 329..353
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 359..379
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 400..422
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 428..455
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 801..822
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 828..851
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 863..887
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 893..921
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 288..453
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
FT REGION 494..513
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 932..951
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 951 AA; 108849 MW; 46D9454B91000ED4 CRC64;
MGWFDDKIHE VFYNVGVRVH KFRLYFLLLS FAILTFASFG FLWFEKQTTR DPQYVFSPAN
APWRYERAVL TEHWPLDEEK FWPGKSYDLH GYVDVIASGR VHPDYGRPNI LNIRYLDEVA
RINDYIVHNL TVPVDINGKH YDIAYTDLCM RYDWACFLND HITMLMPKTR WGNFSGPFAE
FASDIINTQV NITYPIGWRG TEPIYFGALV GAPNLVDEEG HFDFATAIRL TYNTREGKVD
EYGIEWRRKL AKWLTDKENP VSELLEFGVN HNMTLPEGLQ DVADTLAPKF VGTCAILFTF
SFLVSVVLRR HSAGQVMIDW VRSKPLVAAA GLMTPVMATV TSFGLILWCG QLYNAIVNVS
PFLILCIGID DLFIMSAEWH RTNPKDSAEK RIGHTLSEAA VAISITSITD ITTFAVGCYT
TLPGVQMFCM YTCVQCFFCY VYQIIFLGPV LAYAAEMEQN DQHALLFRKA VDPEKTESKL
KLWLLSGSVN RQNQDVHKRK SKKVAPVEEE NEKKSKLGEM VAKLEHTLEK HDEDPGHNSE
ETLVSKIFRE IIGPFILQRS TQVCALLLYL VYISLAIGGC WNIKEGLDPK LLVRESFYLS
KFYEIIDETF WREGLQMQVV VNNPPDLFDP ESRKGFDEMM ADFEGTQYTM NPNATMIWLR
AYENHLETEV HELNIQKPKT SSEWYKRCRD WLIVAGGRRL WQMDLVWANT SFEETPRITA
FRFQLGLRNY RTPTDHTHSC KMMRAIAEKH SKFNVTTFHE YYPFADQYLE LTPSLFQNMF
MDLGTILLVS MIMIPEWRCA IAIVLSIASI NVGVLGFMSY WGVNLDSVSI ITVIMCIGFA
VDLSAHIAYA FSQSYGNSHT RAVAALETLG WPVFLGASST VLGILLLTLV DSYIVQIFFK
TVFLVINFSI LHGLIFLPIL LMKIVRGVRT RDGESNEKPK TQMEMESQTA A
//