ID A8Y4C6_CAEBR Unreviewed; 336 AA.
AC A8Y4C6;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 24-JAN-2024, entry version 79.
DE SubName: Full=Protein CBR-COL-158 {ECO:0000313|EMBL:CAP39746.1};
GN Name=col-158 {ECO:0000313|WormBase:CBG23255};
GN Synonyms=Cbr-col-158 {ECO:0000313|EMBL:CAP39746.1};
GN ORFNames=CBG23255 {ECO:0000313|WormBase:CBG23255}, CBG_23255
GN {ECO:0000313|EMBL:CAP39746.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP39746.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP39746.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP39746.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
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DR EMBL; HE601533; CAP39746.1; -; Genomic_DNA.
DR RefSeq; XP_002636563.1; XM_002636517.1.
DR AlphaFoldDB; A8Y4C6; -.
DR STRING; 6238.A8Y4C6; -.
DR EnsemblMetazoa; CBG23255.1; CBG23255.1; WBGene00041641.
DR GeneID; 8578558; -.
DR KEGG; cbr:CBG_23255; -.
DR CTD; 8578558; -.
DR WormBase; CBG23255; CBP05522; WBGene00041641; Cbr-col-158.
DR eggNOG; KOG3544; Eukaryota.
DR HOGENOM; CLU_001074_4_4_1; -.
DR InParanoid; A8Y4C6; -.
DR OMA; TDDIWTQ; -.
DR OrthoDB; 2882577at2759; -.
DR Proteomes; UP000008549; Chromosome V.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24637:SF277; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF01391; Collagen; 2.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Reference proteome {ECO:0000313|Proteomes:UP000008549}.
FT DOMAIN 5..57
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 104..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 299..336
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 336 AA; 33163 MW; 9E95B02042D0A486 CRC64;
MSVTKATAGA LCLSSATLIL SLYAIFSIYS DVQSIWSQLD QEMDQFKVTT DDLWTQMLGL
GAATVSNRQR RQGKEQYGGY EAQGVNPGPT CSCNSGNGQG DDALGTGGCP AGPPGPGGSP
GPDGIPGVDG QDGFPGENAE DAQNAPFNGC ITCAPGKPGA PGERGKPGLR GMRGPRGTPG
SPGSDGYPGR PGEMGPPGAP GDDGKPGANG EKGQDVEQPT PRKGPRGPPG DSGHPGPEGD
AGKDGPVGAP GAPGPDGING FQGPGGPPGE EGKPGVDGKI GDDAAYCPCP DRNAPKENYA
SAPSHNPSNA PGASYSAGTG GYSGGTGHAQ NSYGKK
//