ID A9D2T9_HOEPD Unreviewed; 647 AA.
AC A9D2T9;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE SubName: Full=Mu DNA binding, I gamma subdomain/Mu transposase, Bacteriophage Mu transposase {ECO:0000313|EMBL:EDQ34272.1};
GN ORFNames=HPDFL43_14782 {ECO:0000313|EMBL:EDQ34272.1};
OS Hoeflea phototrophica (strain DSM 17068 / NCIMB 14078 / DFL-43).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Phyllobacteriaceae; Hoeflea.
OX NCBI_TaxID=411684 {ECO:0000313|EMBL:EDQ34272.1, ECO:0000313|Proteomes:UP000004291};
RN [1] {ECO:0000313|EMBL:EDQ34272.1, ECO:0000313|Proteomes:UP000004291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DFL-43 {ECO:0000313|EMBL:EDQ34272.1,
RC ECO:0000313|Proteomes:UP000004291};
RA Wagner-Dobler I., Ferriera S., Johnson J., Kravitz S., Beeson K.,
RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EDQ34272.1, ECO:0000313|Proteomes:UP000004291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DFL-43 {ECO:0000313|EMBL:EDQ34272.1,
RC ECO:0000313|Proteomes:UP000004291};
RA Fiebig A.;
RL Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDQ34272.1}.
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DR EMBL; ABIA03000004; EDQ34272.1; -; Genomic_DNA.
DR RefSeq; WP_007198715.1; NZ_CM002917.1.
DR AlphaFoldDB; A9D2T9; -.
DR STRING; 411684.HPDFL43_14782; -.
DR eggNOG; COG2801; Bacteria.
DR HOGENOM; CLU_027265_1_0_5; -.
DR OrthoDB; 5287589at2; -.
DR Proteomes; UP000004291; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR Gene3D; 6.10.250.2550; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 2.30.30.130; Transposase, Mu, C-terminal; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR003314; Mu-type_HTH.
DR InterPro; IPR015126; Mu_I-gamma.
DR InterPro; IPR004189; Phage_Mu_transposase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR015378; Transposase-like_Mu_C.
DR InterPro; IPR009004; Transposase_Mu_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF02914; DDE_2; 1.
DR Pfam; PF02316; HTH_Tnp_Mu_1; 1.
DR Pfam; PF09039; HTH_Tnp_Mu_2; 1.
DR Pfam; PF09299; Mu-transpos_C; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF50610; mu transposase, C-terminal domain; 1.
DR SUPFAM; SSF46955; Putative DNA-binding domain; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS51702; HTH_MU; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004291}.
FT DOMAIN 1..70
FT /note="HTH Mu-type"
FT /evidence="ECO:0000259|PROSITE:PS51702"
FT DOMAIN 238..455
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 647 AA; 72366 MW; BE774B4A7A17601A CRC64;
MRQFFTPKEI ADAAGVSERA INQMARKSHW RHQDQKARKR AGRGGGWEYH VSLFPQAAQA
RLMVIHGAPA NANRNKLADA RSKLWARYEC LSKDRKAACE ARLKIVADVA LLITGGLSET
AAVAMAAQTH HVSPRAVRNW RGRIAGHERQ DWLAALADQY QSTSSFAECD PNAWAALKSD
FLRPERPAFS ACYRRMKAAA KEQGWSPIPA ERALRRRLEA EVPKPVQTAA RQKRDQVKNL
YPAQRRDRSM LHAMEAVNMD GHKIDVFVML PGKKLPTRVI LLALQDLYSG KIVAWRLAPT
ENKDTIRLVI GDMVTNHGIP DKCLLDNGRA FASKWISGGS PNRYRFKIRD EDPLGLFTTL
GVEIIWAMPY SGQSKPIERA FRDLAEDIAK HPFCAGAYTG NTPDAKPENY ASRAIPLDEF
TPHVARMIAE HNARPGRKAG TAKGRSFDET FSASLEDPAT LIRWPTENQR ALWLLAGERI
RTKKGSGEIE IFGNRYWNAA LNAHAGDHVT IRFDPDHLTR PIRVYDAMDN LICIAECIAD
TGFFDTSAAR EHAAKRNQLT RAIRESARLH AELSPDALAE IYGAGKAAPA TMPEPPKFKR
IAVGALRAEP QAQTEWDEQS EQAFSRAMRM LEENVVEFPA KGEKPVR
//
