ID A9E3D1_9FLAO Unreviewed; 607 AA.
AC A9E3D1;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 67.
DE SubName: Full=TPR-repeat-containing protein {ECO:0000313|EMBL:EDP95495.1};
GN ORFNames=KAOT1_11246 {ECO:0000313|EMBL:EDP95495.1};
OS Kordia algicida OT-1.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Kordia.
OX NCBI_TaxID=391587 {ECO:0000313|EMBL:EDP95495.1, ECO:0000313|Proteomes:UP000002945};
RN [1] {ECO:0000313|EMBL:EDP95495.1, ECO:0000313|Proteomes:UP000002945}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OT-1 {ECO:0000313|EMBL:EDP95495.1,
RC ECO:0000313|Proteomes:UP000002945};
RX PubMed=21622754; DOI=10.1128/JB.05241-11;
RA Lee H.S., Kang S.G., Kwon K.K., Lee J.H., Kim S.J.;
RT "Genome sequence of the algicidal bacterium Kordia algicida OT-1.";
RL J. Bacteriol. 193:4031-4032(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDP95495.1}.
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DR EMBL; ABIB01000008; EDP95495.1; -; Genomic_DNA.
DR RefSeq; WP_007094800.1; NZ_DS544873.1.
DR AlphaFoldDB; A9E3D1; -.
DR STRING; 391587.KAOT1_11246; -.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_030864_0_0_10; -.
DR OrthoDB; 5295174at2; -.
DR Proteomes; UP000002945; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR10098; RAPSYN-RELATED; 1.
DR PANTHER; PTHR10098:SF106; TETRATRICOPEPTIDE REPEAT PROTEIN 28; 1.
DR Pfam; PF12833; HTH_18; 1.
DR Pfam; PF17874; TPR_MalT; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SMART; SM00028; TPR; 5.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002945};
KW Signal {ECO:0000256|SAM:SignalP};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..27
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 28..607
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002737026"
FT TRANSMEM 403..423
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 335..368
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 503..595
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
FT COILED 424..458
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 607 AA; 69748 MW; 80E3DBE8966BC12D CRC64;
MTIFRFRQWS MFITCIFLYC FTITTYAQNS EVTASQKDLK AFEASLQSMS FKDIVEEYYV
HRIPDSAKAA TVINYLRTNF TTSKDNNEVA EAYITMSSWQ NKNNNLQSAL ASLAIGIEKS
KQAGNTPLLY EAYKKKGTYE LFGGITEDAL ESFLEALALA KKMNTLKEQI ETKNNISLIK
IQVNDNLGAI DFYLENLQQI KASEDKSLES KIVTIYLGLT KAYINLDKHD EASWYINQGL
SISKQTNNVA YQAYFKTFLG EIESNRGNYE KAHQLFKEVK ELINKAGGSR SLDMFLKLYI
GRNYAAQNKH ELAIQEFLEG ERLLQKNDID YLSIQGLYTG LAKSYMATEN IKESSKYFNK
ATEIDAKNDK IRAILKSRIT KTELDGLKEQ IDAIEVKSQQ TTYYYALGIG ILLIVIIGLI
VYYKKQQRKN KARFQNVIRQ LEEKRQQEKL RQENVITKEE VKPEKSVVSE KSKRIRKAQP
EIDEKTQEIL NKLAIFEADE LFLSKESTLV EVAKKIQTNT TYLSKVINTY KEKSFTAYIT
DLRVDYAIER LSVDKKFRSF TIGAIAQEIG FKRSESLSKA FKVKTGLYPS YFIKELEKQE
VTGLNQS
//
