ID A9RTN9_PHYPA Unreviewed; 486 AA.
AC A9RTN9;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE RecName: Full=PCI domain-containing protein {ECO:0000259|PROSITE:PS50250};
GN ORFNames=PHYPA_001734 {ECO:0000313|EMBL:PNR63309.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR63309.1};
RN [1] {ECO:0000313|EMBL:PNR63309.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c1_37270V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR63309.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c1_37270V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c1_37270V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SIMILARITY: Belongs to the proteasome subunit S3 family.
CC {ECO:0000256|ARBA:ARBA00007912}.
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DR EMBL; ABEU02000001; PNR63309.1; -; Genomic_DNA.
DR RefSeq; XP_001757567.1; XM_001757515.1.
DR AlphaFoldDB; A9RTN9; -.
DR STRING; 3218.A9RTN9; -.
DR PaxDb; 3218-PP1S28_26V6-1; -.
DR EnsemblPlants; Pp3c1_37270V3.1; Pp3c1_37270V3.1; Pp3c1_37270.
DR EnsemblPlants; Pp3c1_37278V3.1; Pp3c1_37278V3.1; Pp3c1_37278.
DR Gramene; Pp3c1_37270V3.1; Pp3c1_37270V3.1; Pp3c1_37270.
DR Gramene; Pp3c1_37278V3.1; Pp3c1_37278V3.1; Pp3c1_37278.
DR eggNOG; KOG2581; Eukaryota.
DR InParanoid; A9RTN9; -.
DR OMA; AKLWFYI; -.
DR OrthoDB; 514836at2759; -.
DR Proteomes; UP000006727; Chromosome 1.
DR GO; GO:0008541; C:proteasome regulatory particle, lid subcomplex; IBA:GO_Central.
DR GO; GO:0030234; F:enzyme regulator activity; IEA:InterPro.
DR GO; GO:0042176; P:regulation of protein catabolic process; IEA:InterPro.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR InterPro; IPR013586; 26S_Psome_reg_C.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10758:SF2; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3; 1.
DR PANTHER; PTHR10758; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; 1.
DR Pfam; PF01399; PCI; 1.
DR Pfam; PF08375; Rpn3_C; 1.
DR SMART; SM00753; PAM; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006727}.
FT DOMAIN 237..418
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
FT REGION 450..486
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..479
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 486 AA; 55182 MW; F61B7972B0AB40DA CRC64;
MGQEVDMKPA DPAPPSVLSQ MKVVITSIEK GVSNKEMRLM ARANRQMLVV RRQLNASVVN
AFLKHALPAG SDALARLSPF VAGIAKNEKD MDVDTPPISG QSHVSQKQSG LPEVEIFCYL
LVTIFLIDQK QLEESKTCSS AAVKRLQQLN RRTLDVLAAR VYYYYSYSHE LTNSLADIRG
TLLALHQTAT LRHDELGQET LLNLLLRNYL HYNLYDHAEK LRSKTQRSDS HSNQQLCRYL
YYLGKIRTIQ LEYTDAKECL LQAARKAPTS ARGFKIQCTK WAVIVRLLLG EILERTTFMQ
PGMRKALRPY FDLTNAVRIG DLELFRQVAE KYSSVFTADK CHNLIVRLRH NVIRTGLRNI
SIAYSRISLA DVATKLHLDS ATPVDDAESI VTKAIRDGGI DASVDHSNGW MQSKETSDIY
STQEPQQAFH SRIAFCLNTH NEAVKALRFP PDAHKKQLES SEKRRERQQQ EQELAKHIAE
EDDDEF
//
