ID A9STA3_PHYPA Unreviewed; 871 AA.
AC A9STA3;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE RecName: Full=Smr domain-containing protein {ECO:0000259|PROSITE:PS50828};
GN ORFNames=PHYPA_007800 {ECO:0000313|EMBL:PNR54124.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR54124.1};
RN [1] {ECO:0000313|EMBL:PNR54124.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c5_16950V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR54124.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004 {ECO:0000313|EnsemblPlants:Pp3c5_16950V3.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:Pp3c5_16950V3.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
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DR EMBL; ABEU02000005; PNR54124.1; -; Genomic_DNA.
DR RefSeq; XP_001769572.1; XM_001769520.1.
DR AlphaFoldDB; A9STA3; -.
DR STRING; 3218.A9STA3; -.
DR PaxDb; 3218-PP1S116_71V6-1; -.
DR EnsemblPlants; Pp3c5_16950V3.1; Pp3c5_16950V3.1; Pp3c5_16950.
DR Gramene; Pp3c5_16950V3.1; Pp3c5_16950V3.1; Pp3c5_16950.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_5_1; -.
DR InParanoid; A9STA3; -.
DR OMA; MHEMEIK; -.
DR OrthoDB; 1203247at2759; -.
DR Proteomes; UP000006727; Chromosome 5.
DR Gene3D; 3.30.1370.110; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR002625; Smr_dom.
DR InterPro; IPR036063; Smr_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR47936:SF1; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN GUN1, CHLOROPLASTIC; 1.
DR PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR SMART; SM00463; SMR; 1.
DR SUPFAM; SSF160443; SMR domain-like; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 9.
DR PROSITE; PS50828; SMR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006727};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 233..267
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 268..303
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 304..338
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 339..373
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 374..408
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 409..443
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 444..478
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 479..513
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 514..548
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 740..823
FT /note="Smr"
FT /evidence="ECO:0000259|PROSITE:PS50828"
FT REGION 33..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 70..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..56
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 77..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 871 AA; 95550 MW; 22A196743DAC8307 CRC64;
MASGAGFLSA EAKAASAAAG VGVVVGGHGS AALKGAASSS RGGRWRPTTR QGGQHSGDAW
VAQRVAVAGS GRAGWGHQQP GHQQQSQTAS AATTAGGLNA EFCGRRSTRL VSKFHHGRQK
LYMGKHSPEA DMAAQEILSA PSMSGNSTAL LLEKWSHQLV GLEDFPYLLR ELGNRGEWER
ALQGYEWMVQ QGHLRSEWSK LASIMISTLG RLGKVEIALD VFNRAQKAGF GNNVYAYSAM
VSAYGRSGRC REALKVFQAM KKAGCKPNLI TYNTIIDACG KGGVDLKKAL DIFEEMQKEG
VEPDRITFNS LIAVCSRGSL WEDSQRVFAE MQRRGIEQDI FTYNTLIDAV CKGGQMELAA
SIMSSMRLKN ISPNVVTYST MIDGYGKLGC FEEAIGLYHD MKESGVRPDR VSYNTLIDIY
AKLGRFDDAL TACKDMERVG LKADVVTYNA LIDAYGKQGK YKDAAGLFDK MKAEGLVPNV
LTYSALIDAY SKAGMHQDAT SIFVEFKRAG LKPDVVLYSS LIDSCCKCGL VEDAVVLLQE
MTQAGIQPNI VTYNSLIDAY GRNGQVDNVE AAKGNMPINV FNKVGDRSTE IICKTLTSQQ
NANDHTGVLA AVSVFHEMQQ FGLKPNVVTF SAILNACSRC SSLQEASVLL EQMRFFDSWV
YGIAHGLLMG LREHVWVEAQ RLFDEIARMD YATGAAFYNA LTDVLWHFGQ RQGAQEVVVA
AKRRQVWENA WWRSEQQFCL DLHLMSVGAA QAMLHVWLLD LRALVWDGHA LPRVLSILTG
WGKHSKVAGF STVKRAVESR LLEIKAPFQV GRYNEGRLVC AGHIVRAWLG DPRTSKLLML
QDAIIKSNPQ WNRFPDGFLS LKEPLLADVA T
//
