ID A9TQF6_PHYPA Unreviewed; 69 AA.
AC A9TQF6;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=60S ribosomal protein L38 {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHYPA_004959 {ECO:0000313|EMBL:PNR57965.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218 {ECO:0000313|EMBL:PNR57965.1};
RN [1] {ECO:0000313|EMBL:PNR57965.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004
RC {ECO:0000313|EnsemblPlants:PAC:32941766.CDS.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
RN [2] {ECO:0000313|EMBL:PNR57965.1, ECO:0000313|Proteomes:UP000006727}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Gransden 2004
RC {ECO:0000313|EnsemblPlants:PAC:32941766.CDS.1,
RC ECO:0000313|Proteomes:UP000006727};
RX PubMed=29237241; DOI=10.1111/tpj.13801;
RA Lang D., Ullrich K.K., Murat F., Fuchs J., Jenkins J., Haas F.B.,
RA Piednoel M., Gundlach H., Van Bel M., Meyberg R., Vives C., Morata J.,
RA Symeonidi A., Hiss M., Muchero W., Kamisugi Y., Saleh O., Blanc G.,
RA Decker E.L., van Gessel N., Grimwood J., Hayes R.D., Graham S.W.,
RA Gunter L.E., McDaniel S.F., Hoernstein S.N.W., Larsson A., Li F.W.,
RA Perroud P.F., Phillips J., Ranjan P., Rokshar D.S., Rothfels C.J.,
RA Schneider L., Shu S., Stevenson D.W., Thummler F., Tillich M.,
RA Villarreal Aguilar J.C., Widiez T., Wong G.K., Wymore A., Zhang Y.,
RA Zimmer A.D., Quatrano R.S., Mayer K.F.X., Goodstein D., Casacuberta J.M.,
RA Vandepoele K., Reski R., Cuming A.C., Tuskan G.A., Maumus F., Salse J.,
RA Schmutz J., Rensing S.A.;
RT "The Physcomitrella patens chromosome-scale assembly reveals moss genome
RT structure and evolution.";
RL Plant J. 93:515-533(2018).
RN [3] {ECO:0000313|EnsemblPlants:PAC:32941766.CDS.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (DEC-2020) to UniProtKB.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL38 family.
CC {ECO:0000256|ARBA:ARBA00007803, ECO:0000256|RuleBase:RU003445}.
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DR EMBL; ABEU02000003; PNR57965.1; -; Genomic_DNA.
DR RefSeq; XP_001780856.1; XM_001780804.1.
DR AlphaFoldDB; A9TQF6; -.
DR STRING; 3218.A9TQF6; -.
DR PaxDb; 3218-PP1S288_10V6-1; -.
DR EnsemblPlants; Pp3c3_25640V3.1; PAC:32941766.CDS.1; Pp3c3_25640.
DR EnsemblPlants; Pp3c3_25640V3.2; PAC:32941767.CDS.1; Pp3c3_25640.
DR Gramene; Pp3c3_25640V3.1; PAC:32941766.CDS.1; Pp3c3_25640.
DR Gramene; Pp3c3_25640V3.2; PAC:32941767.CDS.1; Pp3c3_25640.
DR eggNOG; KOG3499; Eukaryota.
DR HOGENOM; CLU_152057_2_0_1; -.
DR InParanoid; A9TQF6; -.
DR OMA; GCAEDEC; -.
DR OrthoDB; 242478at2759; -.
DR Proteomes; UP000006727; Chromosome 3.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0022618; P:protein-RNA complex assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.720.90; -; 1.
DR InterPro; IPR002675; Ribosomal_eL38.
DR InterPro; IPR038464; Ribosomal_eL38_sf.
DR PANTHER; PTHR10965; 60S RIBOSOMAL PROTEIN L38; 1.
DR PANTHER; PTHR10965:SF0; 60S RIBOSOMAL PROTEIN L38; 1.
DR Pfam; PF01781; Ribosomal_L38e; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006727};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000256|RuleBase:RU003445};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980,
KW ECO:0000256|RuleBase:RU003445}.
SQ SEQUENCE 69 AA; 7942 MW; 84CE6C34BE5FADB0 CRC64;
MPRQINEIKD FLLTARRKDA RSVKIKRSKD VVKFKVRCSK NLYTLCVSDS DKANKLKQSL
PPGLTVHDL
//
