ID A9WGV4_CHLAA Unreviewed; 625 AA.
AC A9WGV4;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 110.
DE SubName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ABY36270.1};
GN OrderedLocusNames=Caur_3071 {ECO:0000313|EMBL:ABY36270.1};
OS Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).
OC Bacteria; Chloroflexota; Chloroflexia; Chloroflexales; Chloroflexineae;
OC Chloroflexaceae; Chloroflexus.
OX NCBI_TaxID=324602 {ECO:0000313|EMBL:ABY36270.1, ECO:0000313|Proteomes:UP000002008};
RN [1] {ECO:0000313|Proteomes:UP000002008}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29366 / DSM 635 / J-10-fl
RC {ECO:0000313|Proteomes:UP000002008};
RX PubMed=21714912; DOI=10.1186/1471-2164-12-334;
RA Tang K.H., Barry K., Chertkov O., Dalin E., Han C.S., Hauser L.J.,
RA Honchak B.M., Karbach L.E., Land M.L., Lapidus A., Larimer F.W.,
RA Mikhailova N., Pitluck S., Pierson B.K., Blankenship R.E.;
RT "Complete genome sequence of the filamentous anoxygenic phototrophic
RT bacterium Chloroflexus aurantiacus.";
RL BMC Genomics 12:334-334(2011).
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DR EMBL; CP000909; ABY36270.1; -; Genomic_DNA.
DR RefSeq; WP_012258923.1; NC_010175.1.
DR RefSeq; YP_001636659.1; NC_010175.1.
DR AlphaFoldDB; A9WGV4; -.
DR STRING; 324602.Caur_3071; -.
DR EnsemblBacteria; ABY36270; ABY36270; Caur_3071.
DR KEGG; cau:Caur_3071; -.
DR PATRIC; fig|324602.8.peg.3475; -.
DR eggNOG; COG3284; Bacteria.
DR HOGENOM; CLU_000445_8_12_0; -.
DR InParanoid; A9WGV4; -.
DR Proteomes; UP000002008; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF13596; PAS_10; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002008};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 188..241
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 317..541
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 625 AA; 67851 MW; 37AB12EE3808C50A CRC64;
MATPSIPPIQ RSWARCQARG LDPTCAPQTG MINLSGWSHL QALVRSSIED LYQLSDHPGF
VVVICDDQGT IIDMAGDSAI MAQAQQYGIG YGITLAEEYA GTNAVDLALR EALPCQTAGD
DHYCQWLQSF ALAAAPIFSP DGRALGALAI LSLAEERHPY ALGMVIAAAQ AFHSQLRAER
LLNEANDQLT ELYATLDTIN EGLIFVGPNG EIRRLSRRVA SILGINVRSA AGRPLTSVIS
PPPAIAAALQ QLSTLEEQEV IWQTPTGAQA VICGVRPVWD RSRRYLGSVI TLRPTESVRQ
LVQQVVGARA AFTFRDIVGQ SESMRQAMRQ ARLAAAGRGA ILLRGEAGVG KEIFAQAIHN
ASSRAGGPFI RVSCAAIPRQ LIDSELFGVE GTDRQPGRPG KLELAHGGVL YLEAIDALSF
DQQTSLLRVI EMGRVIRTGG ARPIPVDVRV ITTGHGLEQL VEEGRFRADL YARLSAFVVD
IPPLRQRGDD IILLANHMIR RLSEQFGRQV ALDPDALAAL RTYPWPGNVR ELEVVLEQMV
QTNAKSVLTV SDLPPAIARH TTPLLISDSP RLAETQELSE RDAILRAGRA AGGRLGRAAA
LLGISRATLW RKMTRYRISR EDMVP
//
