ID A9WQ05_RENSM Unreviewed; 319 AA.
AC A9WQ05;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=Transcriptional regulator, HTH domain {ECO:0000313|EMBL:ABY23151.1};
GN OrderedLocusNames=RSal33209_1414 {ECO:0000313|EMBL:ABY23151.1};
OS Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 /
OS NBRC 15589 / NCIMB 2235).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae;
OC Renibacterium.
OX NCBI_TaxID=288705 {ECO:0000313|EMBL:ABY23151.1, ECO:0000313|Proteomes:UP000002007};
RN [1] {ECO:0000313|Proteomes:UP000002007}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235
RC {ECO:0000313|Proteomes:UP000002007};
RX PubMed=18723615; DOI=10.1128/JB.00721-08;
RA Wiens G.D., Rockey D.D., Wu Z., Chang J., Levy R., Crane S., Chen D.S.,
RA Capri G.R., Burnett J.R., Sudheesh P.S., Schipma M.J., Burd H.,
RA Bhattacharyya A., Rhodes L.D., Kaul R., Strom M.S.;
RT "Genome sequence of the fish pathogen Renibacterium salmoninarum suggests
RT reductive evolution away from an environmental Arthrobacter ancestor.";
RL J. Bacteriol. 190:6970-6982(2008).
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DR EMBL; CP000910; ABY23151.1; -; Genomic_DNA.
DR RefSeq; WP_012244832.1; NC_010168.1.
DR AlphaFoldDB; A9WQ05; -.
DR STRING; 288705.RSal33209_1414; -.
DR KEGG; rsa:RSal33209_1414; -.
DR eggNOG; COG2378; Bacteria.
DR HOGENOM; CLU_041141_1_0_11; -.
DR Proteomes; UP000002007; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR018356; Tscrpt_reg_HTH_DeoR_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF1; PROTEIN PAFB; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS00894; HTH_DEOR_1; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000002007};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 4..59
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 319 AA; 35361 MW; E35549DB79053C54 CRC64;
MIETSARLLQ LLSLLQVRRE WTGSALAQRM SVTERTVRRD VDKLRNLGYP INASPGVAGG
YQLGAGAELP PLLLDDEEAL AVALGLSNVA VGPVAGIGEA SVRALAKLEQ VLPPRLRPRF
TSLKSAVSRI AAPIDAVDPQ LLTQTSAAIS ERRALGFHYQ KHDGESSPRV VEPYRLVDSG
QRWYLVAFDL DRQDWRTYRV DRIISKPQER QRFSARPLPA TDLAAYVHKA ITRSPYRYDL
VVRVHAATSE VAEAFSTATA VLEAEGPDRT LLRFGWDSLD SPLAYLAERG MDFDILAPPE
LRERAKLMAK RLLRAIDSD
//
