ID B0CSS6_LACBS Unreviewed; 519 AA.
AC B0CSS6;
DT 26-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2008, sequence version 1.
DT 08-NOV-2023, entry version 53.
DE RecName: Full=Pre-mRNA-processing protein 45 {ECO:0000256|ARBA:ARBA00022160, ECO:0000256|RuleBase:RU367140};
DE Flags: Fragment;
GN ORFNames=LACBIDRAFT_229229 {ECO:0000313|EMBL:EDR14894.1};
OS Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver)
OS (Laccaria laccata var. bicolor).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria.
OX NCBI_TaxID=486041 {ECO:0000313|Proteomes:UP000001194};
RN [1] {ECO:0000313|EMBL:EDR14894.1, ECO:0000313|Proteomes:UP000001194}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 / ATCC MYA-4686 {ECO:0000313|Proteomes:UP000001194};
RX PubMed=18322534; DOI=10.1038/nature06556;
RA Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F.,
RA Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J.,
RA Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D.,
RA Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A.,
RA DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P.,
RA Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P.,
RA Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R.,
RA Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H.,
RA Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M.,
RA Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U.,
RA Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J.,
RA Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A.,
RA Tuskan G., Grigoriev I.V.;
RT "The genome of Laccaria bicolor provides insights into mycorrhizal
RT symbiosis.";
RL Nature 452:88-92(2008).
CC -!- FUNCTION: Involved in pre-mRNA splicing.
CC {ECO:0000256|RuleBase:RU367140}.
CC -!- SUBUNIT: Associated with the spliceosome.
CC {ECO:0000256|RuleBase:RU367140}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367140}.
CC -!- SIMILARITY: Belongs to the SNW family. {ECO:0000256|ARBA:ARBA00010197,
CC ECO:0000256|RuleBase:RU367140}.
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DR EMBL; DS547092; EDR14894.1; -; Genomic_DNA.
DR RefSeq; XP_001875453.1; XM_001875418.1.
DR AlphaFoldDB; B0CSS6; -.
DR STRING; 486041.B0CSS6; -.
DR GeneID; 6070786; -.
DR KEGG; lbc:LACBIDRAFT_229229; -.
DR HOGENOM; CLU_006601_2_0_1; -.
DR InParanoid; B0CSS6; -.
DR OrthoDB; 5490078at2759; -.
DR Proteomes; UP000001194; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-UniRule.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR InterPro; IPR017862; SKI-int_prot_SKIP.
DR InterPro; IPR004015; SKI-int_prot_SKIP_SNW-dom.
DR PANTHER; PTHR12096; NUCLEAR PROTEIN SKIP-RELATED; 1.
DR PANTHER; PTHR12096:SF0; SNW DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF02731; SKIP_SNW; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|RuleBase:RU367140};
KW mRNA splicing {ECO:0000256|RuleBase:RU367140};
KW Nucleus {ECO:0000256|RuleBase:RU367140};
KW Reference proteome {ECO:0000313|Proteomes:UP000001194};
KW Spliceosome {ECO:0000256|RuleBase:RU367140}.
FT DOMAIN 139..295
FT /note="SKI-interacting protein SKIP SNW"
FT /evidence="ECO:0000259|Pfam:PF02731"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 87..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 165..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 293..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 305..320
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 334..357
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EDR14894.1"
SQ SEQUENCE 519 AA; 57748 MW; C1055A1D861FA47B CRC64;
PPYRQRAGWK PTSQEDFGDG GSYPECHVAQ YPLGMGKKKA SSGNTLALQV DSEGNVRYDA
IAHQGQRPGK IVQSQFKDLV PLFHRKDIDD SERSMDRPSE DDVQETADKT RAALEKLVNG
KIKAAQPKNV PDSQGKTAFI RYTPGQQNGE AGLKQRIIKM TDVVEDPLEP PRFKHKKIPR
GPPSPPPPVL RSPPRKATAA EQKEWMIPPC ISNWKNNKGF TIPLDKRLAA DGRGLQDIHI
NDNFAKFSEA LFVADRHARE EVRQRSLMQQ KLAQKEKESK EESLRLLAQR AREERGGLAP
KPTAQSQAAL KSSLAAYGSD SESGAESDED SEDDEESRKI RDQMRQEKRR ERERELRMNN
MGTEQRAKQM ARQQNRDISE KVALGLAKPT LSKESMLDSR LFNQESLSGN FADEDSYNLY
DRPLFHGSTA AAAIYKARGN IAEGNEESFG GGTEEGIGKA LDNDRFSLGQ ARVGFEGAAD
QEIKEGPVQF EKDTGDVFGL NQFLDEAKTG KKRGLDTGA
//
