ID B0DKJ3_LACBS Unreviewed; 555 AA.
AC B0DKJ3;
DT 26-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EDR05078.1};
GN ORFNames=LACBIDRAFT_303869 {ECO:0000313|EMBL:EDR05078.1};
OS Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver)
OS (Laccaria laccata var. bicolor).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Hydnangiaceae; Laccaria.
OX NCBI_TaxID=486041 {ECO:0000313|Proteomes:UP000001194};
RN [1] {ECO:0000313|EMBL:EDR05078.1, ECO:0000313|Proteomes:UP000001194}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S238N-H82 / ATCC MYA-4686 {ECO:0000313|Proteomes:UP000001194};
RX PubMed=18322534; DOI=10.1038/nature06556;
RA Martin F., Aerts A., Ahren D., Brun A., Danchin E.G.J., Duchaussoy F.,
RA Gibon J., Kohler A., Lindquist E., Pereda V., Salamov A., Shapiro H.J.,
RA Wuyts J., Blaudez D., Buee M., Brokstein P., Canbaeck B., Cohen D.,
RA Courty P.E., Coutinho P.M., Delaruelle C., Detter J.C., Deveau A.,
RA DiFazio S., Duplessis S., Fraissinet-Tachet L., Lucic E., Frey-Klett P.,
RA Fourrey C., Feussner I., Gay G., Grimwood J., Hoegger P.J., Jain P.,
RA Kilaru S., Labbe J., Lin Y.C., Legue V., Le Tacon F., Marmeisse R.,
RA Melayah D., Montanini B., Muratet M., Nehls U., Niculita-Hirzel H.,
RA Oudot-Le Secq M.P., Peter M., Quesneville H., Rajashekar B., Reich M.,
RA Rouhier N., Schmutz J., Yin T., Chalot M., Henrissat B., Kuees U.,
RA Lucas S., Van de Peer Y., Podila G.K., Polle A., Pukkila P.J.,
RA Richardson P.M., Rouze P., Sanders I.R., Stajich J.E., Tunlid A.,
RA Tuskan G., Grigoriev I.V.;
RT "The genome of Laccaria bicolor provides insights into mycorrhizal
RT symbiosis.";
RL Nature 452:88-92(2008).
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DR EMBL; DS547115; EDR05078.1; -; Genomic_DNA.
DR RefSeq; XP_001884468.1; XM_001884433.1.
DR AlphaFoldDB; B0DKJ3; -.
DR GeneID; 6079912; -.
DR KEGG; lbc:LACBIDRAFT_303869; -.
DR HOGENOM; CLU_007575_3_1_1; -.
DR InParanoid; B0DKJ3; -.
DR OrthoDB; 1614644at2759; -.
DR Proteomes; UP000001194; Unassembled WGS sequence.
DR GO; GO:0008821; F:crossover junction DNA endonuclease activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProt.
DR CDD; cd09906; H3TH_YEN1; 1.
DR CDD; cd09870; PIN_YEN1; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 2.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR006086; XPG-I_dom.
DR InterPro; IPR006084; XPG/Rad2.
DR InterPro; IPR006085; XPG_DNA_repair_N.
DR InterPro; IPR037316; Yen1_H3TH.
DR PANTHER; PTHR11081:SF71; ENDONUCLEASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G13260)-RELATED; 1.
DR PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR Pfam; PF00867; XPG_I; 1.
DR Pfam; PF00752; XPG_N; 1.
DR PRINTS; PR00853; XPGRADSUPER.
DR SMART; SM00484; XPGI; 1.
DR SMART; SM00485; XPGN; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000001194}.
FT DOMAIN 1..114
FT /note="XPG N-terminal"
FT /evidence="ECO:0000259|SMART:SM00485"
FT DOMAIN 121..192
FT /note="XPG-I"
FT /evidence="ECO:0000259|SMART:SM00484"
SQ SEQUENCE 555 AA; 60321 MW; E1D3EB9AD8AD39FE CRC64;
MGIPGIWNIL LKAKQSRPFT ELTVLEGFEA NRRGARTLMI GVDASIWLNQ TQSIFHVPGM
HYQAGENPEL RTLFYRLARF RKLPIHLVFV FDGEHRPSIK RGVNVCTKAH ALTSSFQEFI
EQYGYSFHTA PAEAEAELAV LNSHGIIDAV LSDDADTLLF GATHLIRNPN VKEDGDNINI
YTADAICSTL SLTSGGILLL AILSGGDYDP GCGMTTAYSL ARAGFGDELL HATKTCPPPE
LEQSLEKWRN RLRMALRYND AGHLSRRQVA LSNSVPNTFP DPRILALYVN PITSWSPGQK
LPNTAAWVPR EVNLTKLAAL CERSFTWGTS DGILSCFQEH VWPGMTLYRL VEEANVDPTA
MLTAHFAQTI AEGTFALSSI LCIVRQQKAE KKAVPGYTVE VQTGHLSTAT LSGLRGLRTF
TEATTKSATK KTKILPGRMM VWVPCSILEQ ALPALVARYQ KAQKSKNKPS LAVSSTYKAI
FPKLFPTAAI AGHDTAPVAG PSTDHRVGPI AVHGGASTAA VARGIMAPIS GLNVCPLLGI
ALRSLLSIMP HLVAH
//
