ID B0N4G4_9FIRM Unreviewed; 443 AA.
AC B0N4G4;
DT 08-APR-2008, integrated into UniProtKB/TrEMBL.
DT 08-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Putative DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EDS18566.1};
GN ORFNames=CLORAM_01515 {ECO:0000313|EMBL:EDS18566.1};
OS Thomasclavelia ramosa DSM 1402.
OC Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales;
OC Coprobacillaceae; Thomasclavelia.
OX NCBI_TaxID=445974 {ECO:0000313|EMBL:EDS18566.1, ECO:0000313|Proteomes:UP000005798};
RN [1] {ECO:0000313|EMBL:EDS18566.1, ECO:0000313|Proteomes:UP000005798}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 1402 {ECO:0000313|EMBL:EDS18566.1,
RC ECO:0000313|Proteomes:UP000005798};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Clostridium ramosum(DSM 1402).";
RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EDS18566.1, ECO:0000313|Proteomes:UP000005798}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 1402 {ECO:0000313|EMBL:EDS18566.1,
RC ECO:0000313|Proteomes:UP000005798};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Thiruvilangam P., Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDS18566.1}.
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DR EMBL; ABFX02000005; EDS18566.1; -; Genomic_DNA.
DR RefSeq; WP_003536953.1; NZ_DS499656.1.
DR AlphaFoldDB; B0N4G4; -.
DR eggNOG; COG0272; Bacteria.
DR eggNOG; COG0847; Bacteria.
DR HOGENOM; CLU_047806_0_1_9; -.
DR Proteomes; UP000005798; Unassembled WGS sequence.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17748; BRCT_DNA_ligase_like; 1.
DR CDD; cd06130; DNA_pol_III_epsilon_like; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR038072; GspK_central_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF00533; BRCT; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR SUPFAM; SSF158544; GspK insert domain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000005798}.
SQ SEQUENCE 443 AA; 51189 MW; 609E99421360631A CRC64;
MEQSITFVDV ETPNYQNNSI SSIGVINVDG DGVVTTKYFL VDPEAHFDRF NIELTGITPE
MVADQPNFKE VWSEIEPYFT NSLVVAHNAV FDLSVISACL QRYDLPIFPI FYTCTYRISR
ALKIPSNSYK LNDLSSYYHV TLDNHHNALA DSKACMEIFY YLLKEPNLET LDQYVKCFEP
TKGNKDNKKY LEVLIGLLTG IGFDNYLNKK EISFLNNWLT KNQLPYEYAN IVKELKAVLK
NEYITHYQYL HILNELQYMK SIKAKNIRSL YEFMAILEGI SCDEVINDDE IMELNKWMKE
NEQFKGTYPF NRILNKLEKI IIDKQISTIV TDELLYYIKN FFKPELDQGD LFDVKNKVIC
LTGNFCFGER SQLEKLIVLK QGIISKSVTK KVDYLVLGSK GSAGYKYGKY GAKTNKALTM
KSEGHKIELI SEARLMEVLK LSK
//
