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Database: UniProt
Entry: B0TTR5
LinkDB: B0TTR5
Original site: B0TTR5 
ID   RIMK_SHEHH              Reviewed;         458 AA.
AC   B0TTR5;
DT   10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
DT   08-APR-2008, sequence version 1.
DT   16-JAN-2019, entry version 71.
DE   RecName: Full=Probable alpha-L-glutamate ligase {ECO:0000255|HAMAP-Rule:MF_01552};
DE            EC=6.3.2.- {ECO:0000255|HAMAP-Rule:MF_01552};
GN   Name=rimK {ECO:0000255|HAMAP-Rule:MF_01552};
GN   OrderedLocusNames=Shal_2072;
OS   Shewanella halifaxensis (strain HAW-EB4).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=458817;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HAW-EB4;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E.,
RA   Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T.,
RA   Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Kyrpides N., Kim E., Zhao J.-S., Richardson P.;
RT   "Complete sequence of Shewanella halifaxensis HAW-EB4.";
RL   Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01552};
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01552};
CC       Note=Binds 2 magnesium or manganese ions per subunit.
CC       {ECO:0000255|HAMAP-Rule:MF_01552};
CC   -!- SIMILARITY: In the C-terminal section; belongs to the RimK family.
CC       {ECO:0000305}.
DR   EMBL; CP000931; ABZ76633.1; -; Genomic_DNA.
DR   ProteinModelPortal; B0TTR5; -.
DR   STRING; 458817.Shal_2072; -.
DR   PRIDE; B0TTR5; -.
DR   EnsemblBacteria; ABZ76633; ABZ76633; Shal_2072.
DR   KEGG; shl:Shal_2072; -.
DR   eggNOG; ENOG4105D9I; Bacteria.
DR   eggNOG; COG0189; LUCA.
DR   eggNOG; COG4067; LUCA.
DR   HOGENOM; HOG000293092; -.
DR   KO; K05844; -.
DR   OMA; NYLRCYM; -.
DR   Proteomes; UP000001317; Chromosome.
DR   GO; GO:0016881; F:acid-amino acid ligase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006464; P:cellular protein modification process; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-KW.
DR   Gene3D; 2.40.70.10; -; 1.
DR   Gene3D; 3.30.1490.20; -; 1.
DR   HAMAP; MF_01552; RimK; 1.
DR   InterPro; IPR011761; ATP-grasp.
DR   InterPro; IPR013651; ATP-grasp_RimK-type.
DR   InterPro; IPR013815; ATP_grasp_subdomain_1.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR023533; RimK.
DR   InterPro; IPR004666; RpS6_RimK/Lys_biosynth_LsyX.
DR   Pfam; PF08443; RimK; 1.
DR   SUPFAM; SSF50630; SSF50630; 1.
DR   TIGRFAMs; TIGR00768; rimK_fam; 1.
DR   PROSITE; PS50975; ATP_GRASP; 1.
PE   3: Inferred from homology;
KW   ATP-binding; Complete proteome; Ligase; Magnesium; Manganese;
KW   Metal-binding; Nucleotide-binding; Protein biosynthesis.
FT   CHAIN         1    458       Probable alpha-L-glutamate ligase.
FT                                /FTId=PRO_0000340570.
FT   DOMAIN      267    450       ATP-grasp. {ECO:0000255|HAMAP-
FT                                Rule:MF_01552}.
FT   NP_BIND     341    342       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   NP_BIND     374    376       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   REGION        1    162       Unknown.
FT   REGION      163    458       Alpha-L-glutamate ligase.
FT   METAL       411    411       Magnesium or manganese 1.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       423    423       Magnesium or manganese 1.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       423    423       Magnesium or manganese 2.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       425    425       Magnesium or manganese 2.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   BINDING     304    304       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   BINDING     350    350       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
SQ   SEQUENCE   458 AA;  50125 MW;  FD2535E1CF89601A CRC64;
     MSDNKFIIGS EEWCAFPALG VPAIKARVDS GARTSSIHAV NIRPFKREGE PWVSFELHPI
     QNSRKIILRC ESKVIDRRNI KSSNGEIEKR YVIASVIQLG GHAWEVELTL TNRDSMGYRM
     LLGREAMSNK TLVDPSESFC LGQQNDVEVE QLYGVKSAKK SGLKIGLLAS NPDLYSNRRI
     IEAGEQRGHE MVFLNIKQCY LKLDASEPEV HYRGGRILND LDAVIPRIRP SMTFYGCALT
     RHFESLNIMA LNTSDAITRS RDKLFSLQLL QKNNLDIPTS GFANSPVDTK DLIDMVGGAP
     LIVKLLEGTQ GKGVVLAETT KAAESVINAF KSLHVNLLVQ EFIKEAQGKD LRCFVIDGKV
     VASIERTAAP GEFRANIHQG GSASIVSVSA AERQLALKAA KTMGLRVAGV DIIRSSRGPL
     LLEINSSPGL EGIESATGID IAGAMIDSIE KKLGWKAE
//
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