ID B0X0Z2_CULQU Unreviewed; 678 AA.
AC B0X0Z2;
DT 08-APR-2008, integrated into UniProtKB/TrEMBL.
DT 08-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE SubName: Full=Scaffold attachment factor b {ECO:0000313|EMBL:EDS38384.1, ECO:0000313|EnsemblMetazoa:CPIJ012814-PA};
GN Name=6046059 {ECO:0000313|EnsemblMetazoa:CPIJ012814-PA};
GN ORFNames=CpipJ_CPIJ012814 {ECO:0000313|EMBL:EDS38384.1};
OS Culex quinquefasciatus (Southern house mosquito) (Culex pungens).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae;
OC Culicinae; Culicini; Culex; Culex.
OX NCBI_TaxID=7176;
RN [1] {ECO:0000313|EMBL:EDS38384.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JHB {ECO:0000313|EMBL:EDS38384.1};
RG The Broad Institute Genome Sequencing Platform;
RA Atkinson P.W., Hemingway J., Christensen B.M., Higgs S., Kodira C.,
RA Hannick L., Megy K., O'Leary S., Pearson M., Haas B.J., Mauceli E.,
RA Wortman J.R., Lee N.H., Guigo R., Stanke M., Alvarado L., Amedeo P.,
RA Antoine C.H., Arensburger P., Bidwell S.L., Crawford M., Camaro F.,
RA Devon K., Engels R., Hammond M., Howarth C., Koehrsen M., Lawson D.,
RA Montgomery P., Nene V., Nusbaum C., Puiu D., Romero-Severson J.,
RA Severson D.W., Shumway M., Sisk P., Stolte C., Zeng Q., Eisenstadt E.,
RA Fraser-Liggett C., Strausberg R., Galagan J., Birren B., Collins F.H.;
RT "Annotation of Culex pipiens quinquefasciatus.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblMetazoa:CPIJ012814-PA}
RP IDENTIFICATION.
RC STRAIN=JHB {ECO:0000313|EnsemblMetazoa:CPIJ012814-PA};
RG EnsemblMetazoa;
RL Submitted (MAY-2020) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; DS232249; EDS38384.1; -; Genomic_DNA.
DR RefSeq; XP_001863314.1; XM_001863279.1.
DR AlphaFoldDB; B0X0Z2; -.
DR STRING; 7176.B0X0Z2; -.
DR EnsemblMetazoa; CPIJ012814-RA; CPIJ012814-PA; CPIJ012814.
DR KEGG; cqu:CpipJ_CPIJ012814; -.
DR VEuPathDB; VectorBase:CPIJ012814; -.
DR VEuPathDB; VectorBase:CQUJHB013666; -.
DR eggNOG; KOG4661; Eukaryota.
DR HOGENOM; CLU_405593_0_0_1; -.
DR InParanoid; B0X0Z2; -.
DR OMA; VEVRHMP; -.
DR OrthoDB; 5405075at2759; -.
DR Proteomes; UP000002320; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR PANTHER; PTHR15683:SF8; SCAFFOLD ATTACHMENT FACTOR B, ISOFORM B; 1.
DR PANTHER; PTHR15683; SCAFFOLD ATTACHMENT FACTOR B-RELATED; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF02037; SAP; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002320};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 10..44
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT DOMAIN 253..331
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 44..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 151..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 332..533
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 640..678
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..101
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..130
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..236
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..251
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 342..377
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 378..415
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 425..465
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..533
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 640..664
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 678 AA; 75339 MW; 01E2F40FBE76BC5B CRC64;
MSDAVEKRKL SELRVVDLKQ ELEKRGKDGN GVKNVLIERL TQALKEENKD PESFEFEIGS
VGKTPAKKKA AAAAGKPEEE SGLATSVSNG SVTSEPSLSD MQVRDECTDE SQKEGAAATT
TSGTANGQTE TLIQNISLVI KQEKLDDDEI AQQKAAEVKE PEAPAVEAAT GAGDGGDKTA
AAGAGEKEAE NEDSLNLEIG EEDEKLLHDA TGEKASEKTS DAKSTEEGKS AEKGDSTSKS
KSSPGGEKST VSRNLWVSGL STLTRATDLK LIFSKYGKVI GAKVVTNTRT PGTRCYGYVT
MASAKDATEC ITHLHRTELH GRMISVERAK SDLGPAKAAG GSGTGGSSSN STNTNSKPSE
SSSSKTASSS SSSTVQPSDR KDSKDRSHDR RDSDRRHERG RSQHRSDRSK SVARGRSQAR
ESSPNRSRSN HRAKSIAPRD DRSRSTDKKK DDSKAKDKDA DSKDAKTAST SSTSIGKDQP
QKSKDRRDRE REVLSLQKIR EERDRQRLRE KERQLREEDR RRREIRQRQR EEEQMLRRER
EKLAIERARI EKEKAELLRI ERERQKLERE KIELERLELK RQQRKYGCKF TLLRLIHVSV
SLYIFHKRAG AHTRAGRVCR RPFKNCFELP TFGLIEEAKR NLKRPGDHSS HYDDDRKRSA
GTERRFEAPP PPSISSST
//
