ID B1XXC7_LEPCP Unreviewed; 755 AA.
AC B1XXC7;
DT 20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT 20-MAY-2008, sequence version 1.
DT 24-JAN-2024, entry version 79.
DE SubName: Full=Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACB33908.1};
GN OrderedLocusNames=Lcho_1641 {ECO:0000313|EMBL:ACB33908.1};
OS Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix
OS discophora (strain SP-6)).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Sphaerotilaceae; Leptothrix.
OX NCBI_TaxID=395495 {ECO:0000313|EMBL:ACB33908.1, ECO:0000313|Proteomes:UP000001693};
RN [1] {ECO:0000313|EMBL:ACB33908.1, ECO:0000313|Proteomes:UP000001693}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51168 / LMG 8142 / SP-6
RC {ECO:0000313|Proteomes:UP000001693};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C.,
RA Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.,
RA Kyrpides N., Lykidis A., Emerson D., Richardson P.;
RT "Complete sequence of Leptothrix cholodnii SP-6.";
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; CP001013; ACB33908.1; -; Genomic_DNA.
DR RefSeq; WP_012346669.1; NC_010524.1.
DR AlphaFoldDB; B1XXC7; -.
DR STRING; 395495.Lcho_1641; -.
DR KEGG; lch:Lcho_1641; -.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG3290; Bacteria.
DR eggNOG; COG3447; Bacteria.
DR HOGENOM; CLU_368737_0_0_4; -.
DR OMA; GRITRTH; -.
DR Proteomes; UP000001693; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR007895; MASE1.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF05231; MASE1; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001693};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 45..65
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 71..89
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 96..113
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 157..178
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 190..212
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 224..244
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 264..287
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 299..319
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 332..388
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 406..458
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 458..503
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 536..588
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 620..753
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 755 AA; 83486 MW; 226909C0D8B30E5D CRC64;
MSSAPHVEVS SLWPPTGTLS AIPAQQADRQ RVEMLVLQAV QAQPWLMWLI AALGAWVLSS
LAMWLSRFPG QVASLWYMNV WGLALLLPVP RRQWPGLLLA LALGNLAANL AFGDSLLEAL
RYLPPNLIEM LLGAWLLRGS ESYRRIASSP VDGLKVLLRG SLLPVLAGSA TAVLTLGWQD
DTPLFRIALT WFESTLVGSV TLLPLVLAVL AAERGAVRRD FADPRAWAFA LVSVGVGVFC
LLQLPFPFVY LTLPLVLAAV QLRFMAVAAL VWLMAMVVGT LIAQGLFVAP PQTAYWQQLL
VYAPLLAALL PPLLLAAAVE QARNHHGELS RSRERLRTLY ERTPAMMVST DPDGRLLSVS
RLWLERMGLR RDDVIGRKLV DFLAAESRRR TLTRTWPDLL AAGRCRDVEY RLMRSDGQRI
DVLLSATTER DADGRITRTH AVLEDITRKR LAEELEAEHE RSKVTLESIA DAVITSDPQG
RILYLNPVAV TMIGQPEEQV RGRLYGEVLR RRDVETGAEL PDPVALCLHQ RKRLALPQRV
RLAHAEGSEH VVQESVSPMF AAGGQLIGAV AVMHDVTEAH QLALKLAHRA QHDVLTGLPN
RLLLHDRLHQ GLQLARRNRT VLALMFFDLD RFKAVNDSHG HATGDELLCQ VADRLLKQLR
ATDTACRLGG DEFVVLLSQV EQASDAGDVA THLLEALCKP YQLGKHQADI SASIGIACFP
QDGTDEATLM RNADAAMYQA KQQGRNRVVF FKRPD
//