ID B1Y4V2_LEPCP Unreviewed; 579 AA.
AC B1Y4V2;
DT 20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT 20-MAY-2008, sequence version 1.
DT 27-MAR-2024, entry version 72.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN OrderedLocusNames=Lcho_2400 {ECO:0000313|EMBL:ACB34665.1};
OS Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix
OS discophora (strain SP-6)).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Sphaerotilaceae; Leptothrix.
OX NCBI_TaxID=395495 {ECO:0000313|EMBL:ACB34665.1, ECO:0000313|Proteomes:UP000001693};
RN [1] {ECO:0000313|EMBL:ACB34665.1, ECO:0000313|Proteomes:UP000001693}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51168 / LMG 8142 / SP-6
RC {ECO:0000313|Proteomes:UP000001693};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C.,
RA Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.,
RA Kyrpides N., Lykidis A., Emerson D., Richardson P.;
RT "Complete sequence of Leptothrix cholodnii SP-6.";
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001013; ACB34665.1; -; Genomic_DNA.
DR RefSeq; WP_012347421.1; NC_010524.1.
DR AlphaFoldDB; B1Y4V2; -.
DR STRING; 395495.Lcho_2400; -.
DR KEGG; lch:Lcho_2400; -.
DR eggNOG; COG0608; Bacteria.
DR HOGENOM; CLU_009736_5_1_4; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000001693; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ACB34665.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ACB34665.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000001693}.
FT DOMAIN 75..245
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 334..456
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 480..575
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 579 AA; 61940 MW; DC73C2ED368F04F0 CRC64;
MSTPQIDIRD VPPRAAWALE QAGVHPLLAR LYAARGIRTP SELDDGLARL IPPTELLGAD
AAARLLADAL QAGERIVIVA DYDCDGATAC AVALRGLAML GARPGTLQHV VPDRAVHGYG
LTPTIVDLAL ARPAHERPSV LVTVDNGIAS HAGVAHAQAL GMKVLVTDHH LPAADANGAV
TLPTADVIVN PNQPGCAFES KALAGVGVMF YVLLALRAEL RARGAFDAAN QPRLDALLDL
VALGTVADVV RLDANNRRLV AQGLKRIRSG RMQAGVAALF VAAGRDPMKA SGFDFGFALG
PRLNAAGRLA DMGLGIACLL SDDPGHATEL AQQLDAINRQ RREVESGMKE QAEVLLERLM
PAGEPPPALS LYDPEFHEGV VGIVAGRLKE RLHRPTFVFA RGADGHLKGS GRSIPGFHLR
DALDLVAKRH PEVLKKFGGH AMAAGCTIDE ADFATFDVAL QRVATEWLSP AALQRRLATD
GPLERQWFDT DVVQLLDAAV WGQAFEAPLF TDEVDVVSQR LVGEKHMKLS VRHAGQLREA
IWFGHTEALP ARVRLAYRLS LDEYQGRKRV QMVVEAAAA
//
