ID B1YJ97_EXIS2 Unreviewed; 363 AA.
AC B1YJ97;
DT 20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT 20-MAY-2008, sequence version 1.
DT 27-MAR-2024, entry version 86.
DE SubName: Full=PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ACB61478.1};
GN OrderedLocusNames=Exig_2026 {ECO:0000313|EMBL:ACB61478.1};
OS Exiguobacterium sibiricum (strain DSM 17290 / CIP 109462 / JCM 13490 /
OS 255-15).
OC Bacteria; Bacillota; Bacilli; Bacillales;
OC Bacillales Family XII. Incertae Sedis; Exiguobacterium.
OX NCBI_TaxID=262543 {ECO:0000313|EMBL:ACB61478.1, ECO:0000313|Proteomes:UP000001681};
RN [1] {ECO:0000313|EMBL:ACB61478.1, ECO:0000313|Proteomes:UP000001681}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17290 / CIP 109462 / JCM 13490 / 255-15
RC {ECO:0000313|Proteomes:UP000001681};
RX PubMed=16489412; DOI=10.1007/s00792-005-0497-5;
RA Rodrigues D.F., Goris J., Vishnivetskaya T., Gilichinsky D.,
RA Thomashow M.F., Tiedje J.M.;
RT "Characterization of Exiguobacterium isolates from the Siberian permafrost.
RT Description of Exiguobacterium sibiricum sp. nov.";
RL Extremophiles 10:285-294(2006).
RN [2] {ECO:0000313|EMBL:ACB61478.1, ECO:0000313|Proteomes:UP000001681}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17290 / CIP 109462 / JCM 13490 / 255-15
RC {ECO:0000313|Proteomes:UP000001681};
RX PubMed=19019206; DOI=10.1186/1471-2164-9-547;
RA Rodrigues D.F., Ivanova N., He Z., Huebner M., Zhou J., Tiedje J.M.;
RT "Architecture of thermal adaptation in an Exiguobacterium sibiricum strain
RT isolated from 3 million year old permafrost: a genome and transcriptome
RT approach.";
RL BMC Genomics 9:547-547(2008).
RN [3] {ECO:0000313|Proteomes:UP000001681}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17290 / CIP 109462 / JCM 13490 / 255-15
RC {ECO:0000313|Proteomes:UP000001681};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C.,
RA Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F.,
RA Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T.,
RA Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.;
RT "Complete sequence of chromosome of Exiguobacterium sibiricum 255-15.";
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP001022; ACB61478.1; -; Genomic_DNA.
DR RefSeq; WP_012370896.1; NC_010556.1.
DR AlphaFoldDB; B1YJ97; -.
DR STRING; 262543.Exig_2026; -.
DR KEGG; esi:Exig_2026; -.
DR eggNOG; COG1413; Bacteria.
DR HOGENOM; CLU_733295_0_0_9; -.
DR OrthoDB; 420201at2; -.
DR Proteomes; UP000001681; Chromosome.
DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR Gene3D; 3.30.1370.70; Scaffold protein Nfu/NifU, N-terminal domain; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR014824; Nfu/NifU_N.
DR InterPro; IPR036498; Nfu/NifU_N_sf.
DR InterPro; IPR004155; PBS_lyase_HEAT.
DR InterPro; IPR025989; Virulence_F_dom.
DR PANTHER; PTHR12697:SF5; DEOXYHYPUSINE HYDROXYLASE; 1.
DR PANTHER; PTHR12697; PBS LYASE HEAT-LIKE PROTEIN; 1.
DR Pfam; PF13646; HEAT_2; 1.
DR Pfam; PF08712; Nfu_N; 1.
DR Pfam; PF13769; Virulence_fact; 1.
DR SMART; SM00567; EZ_HEAT; 2.
DR SMART; SM00932; Nfu_N; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF110836; Hypothetical protein SAV1430; 1.
PE 4: Predicted;
KW Lyase {ECO:0000313|EMBL:ACB61478.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001681}.
FT DOMAIN 4..86
FT /note="Scaffold protein Nfu/NifU N-terminal"
FT /evidence="ECO:0000259|SMART:SM00932"
SQ SEQUENCE 363 AA; 41595 MW; 513DE89BA6CF441E CRC64;
MKIIAIEPTP SPNNMKVIVD ETFSEKGQTF EHAFGAPDHV AKLLEIPGIK SVYQVSDFLA
VERFPKYDWR TLVIEIRRSF GEILSDVERH ETDEAFEPVH LFIQFILGVP MQLKGVKGLE
EKRHGLPDRF REAALFVQPY VKNVISDRRW VEQAPRYGDL DESLEEVAQE IEVAYPPERI
DRLKTIASGE EVTFDGQALT SSDWKQRFAA LDELPIELDW IPAYAKLLQD EKMQIRRQAV
VKLGMFEENR LELLDYITNA LHDPSSSVRR TAGDTISDWA LPEAEVMMME ALTDKNKLVR
WRAARFLFDV GTEQSIPRLK EAVQDKEYEV ALQAELALAR IESGEEALGT VWQQMNRMSG
ESS
//
