ID   B1ZSU7_OPITP            Unreviewed;       794 AA.
AC   B1ZSU7;
DT   20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT   20-MAY-2008, sequence version 1.
DT   27-MAR-2024, entry version 75.
DE   SubName: Full=RNA binding S1 domain protein {ECO:0000313|EMBL:ACB74791.1};
GN   OrderedLocusNames=Oter_1507 {ECO:0000313|EMBL:ACB74791.1};
OS   Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1).
OC   Bacteria; Verrucomicrobiota; Opitutae; Opitutales; Opitutaceae; Opitutus.
OX   NCBI_TaxID=452637 {ECO:0000313|EMBL:ACB74791.1, ECO:0000313|Proteomes:UP000007013};
RN   [1] {ECO:0000313|EMBL:ACB74791.1, ECO:0000313|Proteomes:UP000007013}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 11246 / JCM 15787 / PB90-1
RC   {ECO:0000313|Proteomes:UP000007013};
RX   PubMed=21398538; DOI=10.1128/JB.00228-11;
RA   van Passel M.W., Kant R., Palva A., Copeland A., Lucas S., Lapidus A.,
RA   Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J.,
RA   Larimer F.W., Land M.L., Hauser L., Kyrpides N., Mikhailova N.,
RA   Richardson P.P., Janssen P.H., de Vos W.M., Smidt H.;
RT   "Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an
RT   abundant inhabitant of rice paddy soil ecosystems.";
RL   J. Bacteriol. 193:2367-2368(2011).
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DR   EMBL; CP001032; ACB74791.1; -; Genomic_DNA.
DR   RefSeq; WP_012374329.1; NC_010571.1.
DR   AlphaFoldDB; B1ZSU7; -.
DR   STRING; 452637.Oter_1507; -.
DR   KEGG; ote:Oter_1507; -.
DR   eggNOG; COG2183; Bacteria.
DR   HOGENOM; CLU_009833_0_2_0; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000007013; Chromosome.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007013}.
FT   DOMAIN          665..734
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
FT   REGION          733..794
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        746..767
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   794 AA;  86162 MW;  309A2BAB41E099AA CRC64;
     MALPNPDHVL RLAQELNVKV FQVAATAQLL AEGATVPFIA RYRKEVTGEL DETQVLAIRD
     RLDHLTAVDE RRAAILSSLK ERSLLTPALE QAIQAADTLT ALEDLYLPFR PKKRTRATIA
     KEKGLEPLAE LLFAQDPATD AVAAAQAYVG REYVADDGKN QKSKIETVDE ALAGARDIIA
     ERISDDKDAR TRLRARYQSD AIVSSKVLIG KDADPEAAKY KDYFEWSEPL AKAPSHRILA
     MRRGEKESFL MMRVTLPDET LAVAEVAPLF VKAARVAPNA SSSTLNSTCS DQVQLAVADA
     CKRLLCPAME TEMRLDSKKR ADEAAIRVFT GNMRELLLAP PLGQKAVLAI DPGFRTGCKV
     VLLDRQGKLL HNDVVFPDRH EQEARDKLAG FVQFFNVEAI AIGNGTAGRE TEAFVRKLGL
     PATIPIVMVN ESGASIYSAS EVAREEFPDH DLTVRGAVSI GRRLMDPLAE LVKLDPKSIG
     VGQYQHDVDQ IALKRSLDDT VVSSVNGVGV ELNTASKQLL SYVSGLNATT AAAIVARRNE
     HGPFKSRAEL KEVPRLGPKA FEQAAGFLRI RHATHPLDAS AVHPERYALV EKMAADLGAT
     VADLMREGKL RAKLKLEAYV TADVGLPTLN DIMAELAKPG RDPREKFEAF AFDANVHEPK
     DLKPGMKLPG IVTNVTAFGA FVDIGVHQDG LVHISQLADT FVKDAATVVK PQQKVTVTVV
     EVDLARNRIA LSMRSNPEIG PRPSSGPGTA TPSSRSFSSS RPSSGPRSGS PAPAPRAPQS
     LNSDWFSAAL NKKR
//