ID B2IF32_BEII9 Unreviewed; 1649 AA.
AC B2IF32;
DT 10-JUN-2008, integrated into UniProtKB/TrEMBL.
DT 10-JUN-2008, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=DNA helicase, putative {ECO:0000313|EMBL:ACB95597.1};
GN OrderedLocusNames=Bind_1974 {ECO:0000313|EMBL:ACB95597.1};
OS Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB
OS 8712).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Beijerinckiaceae; Beijerinckia.
OX NCBI_TaxID=395963 {ECO:0000313|EMBL:ACB95597.1, ECO:0000313|Proteomes:UP000001695};
RN [1] {ECO:0000313|Proteomes:UP000001695}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9039 / DSM 1715 / NCIMB 8712
RC {ECO:0000313|Proteomes:UP000001695};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F.,
RA Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N.,
RA Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.;
RT "Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC
RT 9039.";
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACB95597.1, ECO:0000313|Proteomes:UP000001695}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9039 / DSM 1715 / NCIMB 8712
RC {ECO:0000313|Proteomes:UP000001695};
RX PubMed=20601475; DOI=10.1128/JB.00656-10;
RA Tamas I., Dedysh S.N., Liesack W., Stott M.B., Alam M., Murrell J.C.,
RA Dunfield P.F.;
RT "Complete genome sequence of Beijerinckia indica subsp. indica.";
RL J. Bacteriol. 192:4532-4533(2010).
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DR EMBL; CP001016; ACB95597.1; -; Genomic_DNA.
DR RefSeq; WP_012384953.1; NC_010581.1.
DR STRING; 395963.Bind_1974; -.
DR KEGG; bid:Bind_1974; -.
DR eggNOG; COG1061; Bacteria.
DR eggNOG; COG1112; Bacteria.
DR eggNOG; COG2852; Bacteria.
DR HOGENOM; CLU_000738_1_0_5; -.
DR OrthoDB; 9757917at2; -.
DR Proteomes; UP000001695; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR Gene3D; 3.10.50.30; Transcription elongation factor, GreA/GreB, C-terminal domain; 1.
DR Gene3D; 3.40.960.10; VSR Endonuclease; 1.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR036953; GreA/GreB_C_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR049468; Restrct_endonuc-II-like_dom.
DR InterPro; IPR001437; Tscrpt_elong_fac_GreA/B_C.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF525; HELICASE SENATAXIN-RELATED; 1.
DR Pfam; PF13086; AAA_11; 1.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF01272; GreA_GreB; 1.
DR Pfam; PF18741; MTES_1575; 1.
DR SUPFAM; SSF54534; FKBP-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52980; Restriction endonuclease-like; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:ACB95597.1};
KW Helicase {ECO:0000313|EMBL:ACB95597.1};
KW Hydrolase {ECO:0000313|EMBL:ACB95597.1};
KW Nucleotide-binding {ECO:0000313|EMBL:ACB95597.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001695}.
FT DOMAIN 434..568
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 1205..1382
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
FT DOMAIN 1425..1518
FT /note="Restriction endonuclease type II-like"
FT /evidence="ECO:0000259|Pfam:PF18741"
FT DOMAIN 1577..1635
FT /note="Transcription elongation factor GreA/GreB C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF01272"
FT REGION 377..396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1541..1577
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1541..1556
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1557..1571
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1649 AA; 183278 MW; 3BDFA3F0357CC4BA CRC64;
MTALPDTAAA RLASLLDYIE ELVRLDENVA KRLGEHRLPN GRSFVLHQHE LHALPGITLN
LIDDDGPIWL AAERLRRSAP PAPPEEAKEW IDVSPDPDAL PVIRSFLLRT VTEKERGALV
SAGQARAEDC AVSMQKVKDD IPLWDVRLRI EDRPEISRLA TEWLENLWTP WAIAERPVRR
SLALYQQLFE IVQLTEMGAN DHPFEIVWGV GLTRWKRDGH EVDLPLIERL VEIEIDEKAA
GTIKIRPRTE IKIGSQTGSQ AADAGVNLRP FDAMGIPGVS LARDAARRLI ATMDQDEGIS
PFQCDSFEPT LRACQTQLDA EGVYLPDTLI LAPEQPVPPA DSRLTVSDRW VIFARRRSDS
FLLNDLNNLK QSIELRTDTN PLPGPARTLV MGPQDGPTTD IWKPLSHNVG ESPASETVSS
PTIEAGDLFF PKPFNDEQVE IIRRLKASDG VVVQGPPGTG KTHTISNIIC HAMALGHRVL
VVSHGEPALA VLRDQLPEGI RDLAISVTAT EREGLKQLET AVRLLQSVVE DIRPDEQNKL
IRDLEAHVLG LREKLAATDK KIAQIATTQL LPAFGHQPAE LARKVVAAST SFHWFEDRPA
GTSIDLAPSD AAIDRLRAAR AVLGPRLQHL SCTLPSVEDL PSGEAMAKLH EDLVRSKTFA
EAAARDPSIR IRLTSPSDIA LAMKAAEALA TLRRIQPIAA AISWLEALAD RSLRGDESDS
LLALIKAFVE DARPVVHQRQ RYIALPVELP AGFDQSAGDA SALVTKLAAG EQVFGLFSFR
AKSFKPLIEG IRVRGLAPAN ANEWQHVRDH LVWRDQVTAL SVRWRALGEE IGAPPVGSAR
DLEDLVGNLD AILIEARKAF DIMGSAFAVI MADGASPQTL WPSVERMTAV EDALRNAAAA
THLAKAQAEL TKLTALFPDA SGKLGKLARD ILNDAIGLER IEPDHISRLW STLRNQIADV
KQHATQMQIV RDVSAAIEAA GASRWAKRLR TEPLVDATDT LLPGDWRDAW DWAAAKAYLM
HIDDRGGLQT LSEERVRLDS DLRNTFERLV KARTFYELGR SMKGTVRSAL MMFTTALRKI
GKGTGKGAAR HRRDARLAMA QCYSAIPCWI MPTWRVAEQL PGEIGSFDLV IMDEASQSDI
KELPALLRGK KILVVGDDKQ VSPSAAFIEN AKLDRLEHNF LQKQPFKTLL LPGSSLYDLA
KVMFPDKLVM LREHFRCAEP IIRFSMGFYP EPLVPLRVPN AHERLDPPLV DIYVPDGRRV
GDKQNPREAE VIVEEIRTII NEPALARIEA HNRWRTIGVV SLIGAKQAAL INRLLLEELG
EEIMRRHHIA CGDSATFQGN ERDVIFLSMI ADPNNKQAQT ATQFEQRFNV AMSRARDRLV
LVRSVHEEEL KHEDLKARII RHFRDPMAEA SAPKGDLAAL CESEFERDMF QRLTERGYRV
LPQVGALGYR IDLVVEGANG QRLAIECDGD KYHGPERWSD DMRRQRILER VGWRFWRCWA
SSFVLNPDSC MMDLVETLDR LNIRPTDEER PIGNFTLHLT ATPKQRSGGK TALSSTPKAH
TEHEDASEGK PPSPEGIRIG DRVIIQYLDD HKTMSFTITK DKEDYANGFL SVGSPLGSQL
LGAVEDEEIA FEESGRARPV LIVQHKRAA
//
